Information for 6-CACAGCATTGYCCAGC (Motif 11)

A T G C T C G A A G T C C G T A A C T G G T A C C G T A C G A T C A G T A C T G G A C T A T G C A G T C C G T A A C T G G T A C
Reverse Opposite:
A C T G A G T C C G A T A C T G A T C G C T G A A G T C G T C A C G T A G A C T A C T G A G T C A C G T A C T G A G C T T A C G
p-value:1e-11
log p-value:-2.672e+01
Information Content per bp:1.728
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.17%
Number of Background Sequences with motif15.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets52.3 +/- 28.5bp
Average Position of motif in Background49.7 +/- 24.4bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.22
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CACAGCATTGYCCAGC
CACAGN----------
 A T G C T C G A A G T C C G T A A C T G G T A C C G T A C G A T C A G T A C T G G A C T A T G C A G T C C G T A A C T G G T A C
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.58
Offset:8
Orientation:reverse strand
Alignment:CACAGCATTGYCCAGC--
--------TGCCCAGNHW
 A T G C T C G A A G T C C G T A A C T G G T A C C G T A C G A T C A G T A C T G G A C T A T G C A G T C C G T A A C T G G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.50
Offset:2
Orientation:forward strand
Alignment:CACAGCATTGYCCAGC
--CAGCC---------
 A T G C T C G A A G T C C G T A A C T G G T A C C G T A C G A T C A G T A C T G G A C T A T G C A G T C C G T A A C T G G T A C
A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:4
Score:0.49
Offset:-3
Orientation:forward strand
Alignment:---CACAGCATTGYCCAGC
GAGCACAGCAGGACA----
 A C G T A C G T A C G T A T G C T C G A A G T C C G T A A C T G G T A C C G T A C G A T C A G T A C T G G A C T A T G C A G T C C G T A A C T G G T A C
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A A C G T A C G T A C G T A C G T

Nfe2l2/MA0150.2/Jaspar

Match Rank:5
Score:0.49
Offset:2
Orientation:forward strand
Alignment:CACAGCATTGYCCAGC-
--CAGCATGACTCAGCA
 A T G C T C G A A G T C C G T A A C T G G T A C C G T A C G A T C A G T A C T G G A C T A T G C A G T C C G T A A C T G G T A C A C G T
A C G T A C G T G T A C C T G A T A C G T G A C T C G A A C G T A C T G C G T A A T G C G C A T G A T C C T G A T A C G A T G C C G T A

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.48
Offset:6
Orientation:forward strand
Alignment:CACAGCATTGYCCAGC
------ATTGCGCAAC
 A T G C T C G A A G T C C G T A A C T G G T A C C G T A C G A T C A G T A C T G G A C T A T G C A G T C C G T A A C T G G T A C
A C G T A C G T A C G T A C G T A C G T A C G T T G C A A G C T A C G T C T A G G A T C C T A G G A T C G T C A C T G A A G T C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:7
Score:0.48
Offset:-1
Orientation:reverse strand
Alignment:-CACAGCATTGYCCAGC
DCTCAGCAGG-------
 A C G T A T G C T C G A A G T C C G T A A C T G G T A C C G T A C G A T C A G T A C T G G A C T A T G C A G T C C G T A A C T G G T A C
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL002.1_INR/Jaspar

Match Rank:8
Score:0.48
Offset:1
Orientation:forward strand
Alignment:CACAGCATTGYCCAGC
-TCAGTCTT-------
 A T G C T C G A A G T C C G T A A C T G G T A C C G T A C G A T C A G T A C T G G A C T A T G C A G T C C G T A A C T G G T A C
A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:9
Score:0.47
Offset:-1
Orientation:reverse strand
Alignment:-CACAGCATTGYCCAGC
DCHCAGCAGGRGGCC--
 A C G T A T G C T C G A A G T C C G T A A C T G G T A C C G T A C G A T C A G T A C T G G A C T A T G C A G T C C G T A A C T G G T A C
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:10
Score:0.47
Offset:-3
Orientation:forward strand
Alignment:---CACAGCATTGYCCAGC
CCACACAGCAGGAGA----
 A C G T A C G T A C G T A T G C T C G A A G T C C G T A A C T G G T A C C G T A C G A T C A G T A C T G G A C T A T G C A G T C C G T A A C T G G T A C
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T A C G T A C G T