Information for 5-CCACATCAATGAC (Motif 10)

A G T C G T A C C G T A G T A C G C T A C A G T T A G C G C T A C T G A C G A T C T A G G T C A A T G C
Reverse Opposite:
T A C G A C G T A G T C C G T A G A C T C A G T A C T G G T C A C A G T C A T G C G A T C A T G T A C G
p-value:1e-11
log p-value:-2.723e+01
Information Content per bp:1.642
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif4.30%
Number of Background Sequences with motif462.8
Percentage of Background Sequences with motif0.94%
Average Position of motif in Targets52.1 +/- 23.8bp
Average Position of motif in Background50.5 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0144.1_Lef1_2/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CCACATCAATGAC---
GAAGATCAATCACTTA
 A G T C G T A C C G T A G T A C G C T A C A G T T A G C G C T A C T G A C G A T C T A G G T C A A T G C A C G T A C G T A C G T
T A C G C G T A T C G A T A C G G C T A C G A T A G T C C G T A C T G A C A G T G A T C C T G A G T A C A G C T G C A T C G T A

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:2
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CCACATCAATGAC
--TCATCAATCA-
 A G T C G T A C C G T A G T A C G C T A C A G T T A G C G C T A C T G A C G A T C T A G G T C A A T G C
A C G T A C G T G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A A C G T

PH0134.1_Pbx1/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CCACATCAATGAC--
TCACCCATCAATAAACA
 A C G T A C G T A G T C G T A C C G T A G T A C G C T A C A G T T A G C G C T A C T G A C G A T C T A G G T C A A T G C A C G T A C G T
G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CCACATCAATGAC
NWAACCACADNN-----
 A C G T A C G T A C G T A C G T A G T C G T A C C G T A G T A C G C T A C A G T T A G C G C T A C T G A C G A T C T A G G T C A A T G C
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T A C G T A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:5
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CCACATCAATGAC-
--ACATCAAAGGNA
 A G T C G T A C C G T A G T A C G C T A C A G T T A G C G C T A C T G A C G A T C T A G G T C A A T G C A C G T
A C G T A C G T C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A

PBX1/MA0070.1/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CCACATCAATGAC-
--CCATCAATCAAA
 A G T C G T A C C G T A G T A C G C T A C A G T T A G C G C T A C T G A C G A T C T A G G T C A A T G C A C G T
A C G T A C G T G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A

PH0150.1_Pou4f3/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CCACATCAATGAC-
GACNTCATTAATAANN
 A C G T A C G T A G T C G T A C C G T A G T A C G C T A C A G T T A G C G C T A C T G A C G A T C T A G G T C A A T G C A C G T
C T A G C T G A T G A C G A T C C A G T G T A C C G T A C G A T C G A T C G T A C T G A C G A T C G T A G T C A A G T C C G A T

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CCACATCAATGAC---
GAAGATCAATCACTAA
 A G T C G T A C C G T A G T A C G C T A C A G T T A G C G C T A C T G A C G A T C T A G G T C A A T G C A C G T A C G T A C G T
T A C G C T A G T C G A T A C G G C T A G C A T A G T C C G T A C T G A C A G T G A T C C T G A A T G C A C G T G C T A C G T A

Hoxa9/MA0594.1/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CCACATCAATGAC
-GCCATAAATCA-
 A G T C G T A C C G T A G T A C G C T A C A G T T A G C G C T A C T G A C G A T C T A G G T C A A T G C
A C G T T A C G G A T C G T A C T C G A A C G T T G C A G C T A G T C A C G A T G A T C G C T A A C G T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CCACATCAATGAC
HNRAATCAAT---
 A G T C G T A C C G T A G T A C G C T A C A G T T A G C G C T A C T G A C G A T C T A G G T C A A T G C
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T A C G T A C G T A C G T