Information for 5-ATCTCRGCAAKAYMCA (Motif 6)

C G T A A G C T A G T C C G A T A G T C C T G A A C T G A T G C C G T A C T G A A C T G C G T A A G T C G T A C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G C T A G A C G T G T A C A G C T A C G T A T C G A G T C A G C T C T A G C G T A A C T G C T G A A C G T
p-value:1e-13
log p-value:-3.021e+01
Information Content per bp:1.881
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets37.0 +/- 15.8bp
Average Position of motif in Background58.9 +/- 11.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1b/MA0483.1/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--ATCTCRGCAAKAYMCA
AAATCACAGCA-------
 A C G T A C G T C G T A A G C T A G T C C G A T A G T C C T G A A C T G A T G C C G T A C T G A A C T G C G T A A G T C G T A C A G T C C G T A
T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--ATCTCRGCAAKAYMCA
AAATCACTGC--------
 A C G T A C G T C G T A A G C T A G T C C G A T A G T C C T G A A C T G A T G C C G T A C T G A A C T G C G T A A G T C G T A C A G T C C G T A
T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MAFK/MA0496.1/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--ATCTCRGCAAKAYMCA
CTGAGTCAGCAATTT---
 A C G T A C G T C G T A A G C T A G T C C G A T A G T C C T G A A C T G A T G C C G T A C T G A A C T G C G T A A G T C G T A C A G T C C G T A
G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T A C G T A C G T A C G T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-ATCTCRGCAAKAYMCA
HWWGTCAGCAWWTTT--
 A C G T C G T A A G C T A G T C C G A T A G T C C T G A A C T G A T G C C G T A C T G A A C T G C G T A A G T C G T A C A G T C C G T A
G T A C C G T A C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A C G A T G C A T G C A T G A C T A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:5
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:ATCTCRGCAAKAYMCA
--GTCAGCANNTN---
 C G T A A G C T A G T C C G A T A G T C C T G A A C T G A T G C C G T A C T G A A C T G C G T A A G T C G T A C A G T C C G T A
A C G T A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-ATCTCRGCAAKAYMCA
GAGCACAGCAGGACA--
 A C G T C G T A A G C T A G T C C G A T A G T C C T G A A C T G A T G C C G T A C T G A A C T G C G T A A G T C G T A C A G T C C G T A
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A A C G T A C G T

Mafb/MA0117.2/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:ATCTCRGCAAKAYMCA
-NGTCAGCANTTT---
 C G T A A G C T A G T C C G A T A G T C C T G A A C T G A T G C C G T A C T G A A C T G C G T A A G T C G T A C A G T C C G T A
A C G T G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T A C G T A C G T A C G T

MAFF/MA0495.1/Jaspar

Match Rank:8
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---ATCTCRGCAAKAYMCA
GCTGAGTCAGCAATTTTT-
 A C G T A C G T A C G T C G T A A G C T A G T C C G A T A G T C C T G A A C T G A T G C C G T A C T G A A C T G C G T A A G T C G T A C A G T C C G T A
A T C G G T A C G C A T C T A G C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A G C A T G C A T G C A T G A C T G C A T A C G T

PB0041.1_Mafb_1/Jaspar

Match Rank:9
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---ATCTCRGCAAKAYMCA
NCTANGTCAGCAAATTT--
 A C G T A C G T A C G T C G T A A G C T A G T C C G A T A G T C C T G A A C T G A T G C C G T A C T G A A C T G C G T A A G T C G T A C A G T C C G T A
C A G T G A T C A G C T C G T A G C T A T C A G A C G T G T A C C G T A C A T G G A T C C G T A G T C A C G T A G C A T G A C T C G A T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:ATCTCRGCAAKAYMCA
-DCTCAGCAGG-----
 C G T A A G C T A G T C C G A T A G T C C T G A A C T G A T G C C G T A C T G A A C T G C G T A A G T C G T A C A G T C C G T A
A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T