Information for 17-AAAGRTCAGG (Motif 43)

T G C A T G C A C G T A T A C G C T A G G A C T A T G C C T G A C T A G C A T G
Reverse Opposite:
G T A C G A T C A G C T A T C G C T G A G A T C A T G C A C G T A C G T A C G T
p-value:1e-5
log p-value:-1.322e+01
Information Content per bp:1.699
Number of Target Sequences with motif47.0
Percentage of Target Sequences with motif6.66%
Number of Background Sequences with motif1456.2
Percentage of Background Sequences with motif3.14%
Average Position of motif in Targets44.6 +/- 24.8bp
Average Position of motif in Background50.2 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-AAAGRTCAGG
CAAAGGTCAG-
 A C G T T G C A T G C A C G T A T A C G C T A G G A C T A T G C C T G A C T A G C A T G
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:2
Score:0.79
Offset:-4
Orientation:reverse strand
Alignment:----AAAGRTCAGG
ANGNAAAGGTCA--
 A C G T A C G T A C G T A C G T T G C A T G C A C G T A T A C G C T A G G A C T A T G C C T G A C T A G C A T G
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:3
Score:0.77
Offset:-4
Orientation:forward strand
Alignment:----AAAGRTCAGG--
TCTCAAAGGTCACGAG
 A C G T A C G T A C G T A C G T T G C A T G C A C G T A T A C G C T A G G A C T A T G C C T G A C T A G C A T G A C G T A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

PB0053.1_Rara_1/Jaspar

Match Rank:4
Score:0.77
Offset:-4
Orientation:forward strand
Alignment:----AAAGRTCAGG--
TCTCAAAGGTCACCTG
 A C G T A C G T A C G T A C G T T G C A T G C A C G T A T A C G C T A G G A C T A T G C C T G A C T A G C A T G A C G T A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

NR4A2/MA0160.1/Jaspar

Match Rank:5
Score:0.73
Offset:1
Orientation:forward strand
Alignment:AAAGRTCAGG
-AAGGTCAC-
 T G C A T G C A C G T A T A C G C T A G G A C T A T G C C T G A C T A G C A T G
A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:6
Score:0.71
Offset:0
Orientation:forward strand
Alignment:AAAGRTCAGG
CAAGGHCANV
 T G C A T G C A C G T A T A C G C T A G G A C T A T G C C T G A C T A G C A T G
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-AAAGRTCAGG
TCAAGGTCAN-
 A C G T T G C A T G C A C G T A T A C G C T A G G A C T A T G C C T G A C T A G C A T G
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:8
Score:0.70
Offset:-7
Orientation:forward strand
Alignment:-------AAAGRTCAGG
AGAGTCCAAAGTCCA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A T G C A C G T A T A C G C T A G G A C T A T G C C T G A C T A G C A T G
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:9
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-AAAGRTCAGG--
CAAAGGTCAAGGG
 A C G T T G C A T G C A C G T A T A C G C T A G G A C T A T G C C T G A C T A G C A T G A C G T A C G T
G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:10
Score:0.69
Offset:-8
Orientation:forward strand
Alignment:--------AAAGRTCAGG
CANAGNNCAAAGTCCA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A T G C A C G T A T A C G C T A G G A C T A T G C C T G A C T A G C A T G
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T A C G T