Information for 3-CTGGCCACACTGCTGC (Motif 4)

A T G C A C G T A C T G C T A G G T A C A G T C C G T A A G T C C G T A A G T C A C G T A T C G G T A C A C G T A C T G G T A C
Reverse Opposite:
A C T G A G T C C G T A A C T G A T G C G T C A C T A G A C G T A C T G C G A T A C T G A C T G A G T C A G T C C G T A A T C G
p-value:1e-13
log p-value:-3.173e+01
Information Content per bp:1.830
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.3 +/- 31.5bp
Average Position of motif in Background82.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:1
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CTGGCCACACTGCTGC
GGAGCTGTCCATGGTGCTGA
 A C G T A C G T A C G T A C G T A T G C A C G T A C T G C T A G G T A C A G T C C G T A A G T C C G T A A G T C A C G T A T C G G T A C A C G T A C T G G T A C
C T A G A T C G G T C A C A T G A G T C G A C T T A C G C A G T A G T C A G T C C T G A C G A T C T A G A T C G G A C T A T C G A G T C G A C T C T A G T C G A

REST/MA0138.2/Jaspar

Match Rank:2
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----CTGGCCACACTGCTGC-
GGCGCTGTCCATGGTGCTGAA
 A C G T A C G T A C G T A C G T A T G C A C G T A C T G C T A G G T A C A G T C C G T A A G T C C G T A A G T C A C G T A T C G G T A C A C G T A C T G G T A C A C G T
C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CTGGCCACACTGCTGC
--GGACACACCCCC--
 A T G C A C G T A C T G C T A G G T A C A G T C C G T A A G T C C G T A A G T C A C G T A T C G G T A C A C G T A C T G G T A C
A C G T A C G T T C A G T A C G G T C A A G T C G T C A A G T C C T G A A G T C G T A C G A T C G T A C A G T C A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---CTGGCCACACTGCTGC
WDNCTGGGCA---------
 A C G T A C G T A C G T A T G C A C G T A C T G C T A G G T A C A G T C C G T A A G T C C G T A A G T C A C G T A T C G G T A C A C G T A C T G G T A C
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GLI2/MA0734.1/Jaspar

Match Rank:5
Score:0.51
Offset:0
Orientation:forward strand
Alignment:CTGGCCACACTGCTGC
GCGACCACACTG----
 A T G C A C G T A C T G C T A G G T A C A G T C C G T A A G T C C G T A A G T C A C G T A T C G G T A C A C G T A C T G G T A C
C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G A C G T A C G T A C G T A C G T

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:6
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CTGGCCACACTGCTGC
--GGCCACRCCCMK--
 A T G C A C G T A C T G C T A G G T A C A G T C C G T A A G T C C G T A A G T C A C G T A T C G G T A C A C G T A C T G G T A C
A C G T A C G T C T A G C T A G T G A C G T A C T G C A A G T C C T A G A G T C A G T C A G T C G T C A C A T G A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:7
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:CTGGCCACACTGCTGC
-TGACCTYA-------
 A T G C A C G T A C T G C T A G G T A C A G T C C G T A A G T C C G T A A G T C A C G T A T C G G T A C A C G T A C T G G T A C
A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:CTGGCCACACTGCTGC
-TTGCAACATN-----
 A T G C A C G T A C T G C T A G G T A C A G T C C G T A A G T C C G T A A G T C A C G T A T C G G T A C A C G T A C T G G T A C
A C G T C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C A C G T A C G T A C G T A C G T A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:9
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:CTGGCCACACTGCTGC
--GGCCACACCCAN--
 A T G C A C G T A C T G C T A G G T A C A G T C C G T A A G T C C G T A A G T C A C G T A T C G G T A C A C G T A C T G G T A C
A C G T A C G T C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G A C G T A C G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.50
Offset:3
Orientation:forward strand
Alignment:CTGGCCACACTGCTGC
---GCCACACCCA---
 A T G C A C G T A C T G C T A G G T A C A G T C C G T A A G T C C G T A A G T C A C G T A T C G G T A C A C G T A C T G G T A C
A C G T A C G T A C G T C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T A C G T