Information for 11-AGWACAACTRCATGAG (Motif 19)

G T C A C T A G C G A T T C G A A G T C C G T A T C G A A G T C A C G T C T G A A G T C T C G A A C G T A C T G C T G A A C T G
Reverse Opposite:
A G T C A G C T A G T C G T C A A C G T C T A G A G C T C G T A C T A G A G C T C G A T A C T G A G C T G C T A A G T C A C G T
p-value:1e-10
log p-value:-2.510e+01
Information Content per bp:1.729
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.13%
Number of Background Sequences with motif11.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets58.5 +/- 23.0bp
Average Position of motif in Background56.5 +/- 33.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0021.1_Dlx2/Jaspar

Match Rank:1
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AGWACAACTRCATGAG
GGAATAATTACCTCAG
 G T C A C T A G C G A T T C G A A G T C C G T A T C G A A G T C A C G T C T G A A G T C T C G A A C G T A C T G C T G A A C T G
T C A G T C A G C T A G C T G A G A C T C G T A C G T A C G A T A C G T C T G A A T G C G A C T G A C T G T A C C T G A A C T G

PB0062.1_Sox12_1/Jaspar

Match Rank:2
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----AGWACAACTRCATGAG
NTTNAGAACAATTA------
 A C G T A C G T A C G T A C G T G T C A C T A G C G A T T C G A A G T C C G T A T C G A A G T C A C G T C T G A A G T C T C G A A C G T A C T G C T G A A C T G
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A A C G T A C G T A C G T A C G T A C G T A C G T

PB0172.1_Sox1_2/Jaspar

Match Rank:3
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--AGWACAACTRCATGAG
NNNTAACAATTATAN---
 A C G T A C G T G T C A C T A G C G A T T C G A A G T C C G T A T C G A A G T C A C G T C T G A A G T C T C G A A C G T A C T G C T G A A C T G
A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G A C G T A C G T A C G T

PB0165.1_Sox11_2/Jaspar

Match Rank:4
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---AGWACAACTRCATGAG
NNCNNAACAATTNT-----
 A C G T A C G T A C G T G T C A C T A G C G A T T C G A A G T C C G T A T C G A A G T C A C G T C T G A A G T C T C G A A C G T A C T G C T G A A C T G
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T A C G T A C G T A C G T A C G T A C G T

PB0072.1_Sox5_1/Jaspar

Match Rank:5
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---AGWACAACTRCATGAG
TTTAGAACAATAAAAT---
 A C G T A C G T A C G T G T C A C T A G C G A T T C G A A G T C C G T A T C G A A G T C A C G T C T G A A G T C T C G A A C G T A C T G C T G A A C T G
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T A C G T A C G T A C G T

PB0063.1_Sox13_1/Jaspar

Match Rank:6
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---AGWACAACTRCATGAG
TTAAGAACAATAAATT---
 A C G T A C G T A C G T G T C A C T A G C G A T T C G A A G T C C G T A T C G A A G T C A C G T C T G A A G T C T C G A A C G T A C T G C T G A A C T G
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T A C G T A C G T A C G T

PH0009.1_Bsx/Jaspar

Match Rank:7
Score:0.52
Offset:0
Orientation:forward strand
Alignment:AGWACAACTRCATGAG
CAGGTAATTACCTCAG
 G T C A C T A G C G A T T C G A A G T C C G T A T C G A A G T C A C G T C T G A A G T C T C G A A C G T A C T G C T G A A C T G
T G A C T G C A C T A G C A T G G A C T T G C A G T C A A C G T A C G T C T G A A T G C G A T C A G C T T A G C C T G A C T A G

PH0068.1_Hoxc13/Jaspar

Match Rank:8
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:AGWACAACTRCATGAG----
----NAATTTTACGAGNTNN
 G T C A C T A G C G A T T C G A A G T C C G T A T C G A A G T C A C G T C T G A A G T C T C G A A C G T A C T G C T G A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T

PB0047.1_Myf6_1/Jaspar

Match Rank:9
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--AGWACAACTRCATGAG
GAAGAACAGGTGTCCG--
 A C G T A C G T G T C A C T A G C G A T T C G A A G T C C G T A T C G A A G T C A C G T C T G A A G T C T C G A A C G T A C T G C T G A A C T G
T C A G T C G A C T G A A T C G T C G A C T G A A G T C C G T A A T C G A C T G G A C T A C T G A C G T A G T C G A T C A C T G A C G T A C G T

PB0067.1_Sox18_1/Jaspar

Match Rank:10
Score:0.50
Offset:-4
Orientation:reverse strand
Alignment:----AGWACAACTRCATGAG
NNTNANAACAATTNNA----
 A C G T A C G T A C G T A C G T G T C A C T A G C G A T T C G A A G T C C G T A T C G A A G T C A C G T C T G A A G T C T C G A A C G T A C T G C T G A A C T G
C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A A C G T A C G T A C G T A C G T