Information for 4-GGCCACAGAG (Motif 7)

A C T G T A C G A G T C G T A C C G T A A T G C C G T A A C T G C G T A A C T G
Reverse Opposite:
A G T C C G A T A G T C C G A T A T C G A C G T A C T G A C T G A G T C A G T C
p-value:1e-27
log p-value:-6.218e+01
Information Content per bp:1.869
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif3.05%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets54.9 +/- 26.2bp
Average Position of motif in Background23.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1/MA0002.2/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GGCCACAGAG
AAACCACAGAN
 A C G T A C T G T A C G A G T C G T A C C G T A A T G C C G T A A C T G C G T A A C T G
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:2
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GGCCACAGAG-------
NGAGGTCANNGAGTTCANNN
 A C G T A C G T A C G T A C T G T A C G A G T C G T A C C G T A A T G C C G T A A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A T C A G C T G A C T A G C A T G A C G T A T G C C G T A A T G C G C A T T C A G C T G A A C T G A C G T C A G T A G T C C G T A C A G T C T A G C A T G

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GGCCACAGAG
NWAACCACADNN
 A C G T A C G T A C T G T A C G A G T C G T A C C G T A A T G C C G T A A C T G C G T A A C T G
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

ZBTB7A/MA0750.1/Jaspar

Match Rank:4
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GGCCACAGAG
GGCGACCACCGA-
 A C G T A C G T A C G T A C T G T A C G A G T C G T A C C G T A A T G C C G T A A C T G C G T A A C T G
A C T G T C A G A T G C C T A G G T C A A G T C A T G C G T C A A G T C G T A C C A T G T G C A A C G T

GLI2/MA0734.1/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GGCCACAGAG
GCGACCACACTG
 A C G T A C G T A C T G T A C G A G T C G T A C C G T A A T G C C G T A A C T G C G T A A C T G
C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G

NFY(CCAAT)/Promoter/Homer

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GGCCACAGAG
AGCCAATCGG
 A C T G T A C G A G T C G T A C C G T A A T G C C G T A A C T G C G T A A C T G
T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GGCCACAGAG
---CACAGN-
 A C T G T A C G A G T C G T A C C G T A A T G C C G T A A C T G C G T A A C T G
A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T

ESR2/MA0258.2/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GGCCACAGAG----
AGGTCACCCTGACCT
 A C G T A C T G T A C G A G T C G T A C C G T A A T G C C G T A A C T G C G T A A C T G A C G T A C G T A C G T A C G T
C T G A C A T G C T A G A C G T A T G C C G T A A T G C T G A C T A G C G C A T T C A G G T C A G A T C G A T C G A C T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GGCCACAGAG
AAACCACAGC-
 A C G T A C T G T A C G A G T C G T A C C G T A A T G C C G T A A C T G C G T A A C T G
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GGCCACAGAG
NAAACCACAG--
 A C G T A C G T A C T G T A C G A G T C G T A C C G T A A T G C C G T A A C T G C G T A A C T G
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T