Information for 3-TTGGCAAATG (Motif 6)

A C G T A C G T A C T G T A C G G T A C C G T A C G T A C G T A C A G T C T A G
Reverse Opposite:
A G T C G C T A A C G T A C G T C G A T A C T G A G T C A G T C G T C A C G T A
p-value:1e-27
log p-value:-6.218e+01
Information Content per bp:1.856
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif3.05%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets50.5 +/- 24.5bp
Average Position of motif in Background87.2 +/- 13.2bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--TTGGCAAATG
NNTTGGCANN--
 A C G T A C G T A C G T A C G T A C T G T A C G G T A C C G T A C G T A C G T A C A G T C T A G
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.71
Offset:0
Orientation:forward strand
Alignment:TTGGCAAATG
TTGGCA----
 A C G T A C G T A C T G T A C G G T A C C G T A C G T A C G T A C A G T C T A G
G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TTGGCAAATG
NTTGGCANN--
 A C G T A C G T A C G T A C T G T A C G G T A C C G T A C G T A C G T A C A G T C T A G
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TTGGCAAATG
CTTGGCAA---
 A C G T A C G T A C G T A C T G T A C G G T A C C G T A C G T A C G T A C A G T C T A G
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:5
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:TTGGCAAATG
-TGGAAAA--
 A C G T A C G T A C T G T A C G G T A C C G T A C G T A C G T A C A G T C T A G
A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:6
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TTGGCAAATG
NATGGAAAAN-
 A C G T A C G T A C G T A C T G T A C G G T A C C G T A C G T A C G T A C A G T C T A G
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:7
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TTGGCAAATG
AATGGAAAAT-
 A C G T A C G T A C G T A C T G T A C G G T A C C G T A C G T A C G T A C A G T C T A G
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TTGGCAAATG
ATATGCAAAT-
 A C G T A C G T A C G T A C T G T A C G G T A C C G T A C G T A C G T A C A G T C T A G
G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TTGGCAAATG
GGTTGGCAT---
 A C G T A C G T A C G T A C G T A C T G T A C G G T A C C G T A C G T A C G T A C A G T C T A G
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TTGGCAAATG
GTTGCGCAAT-
 A C G T A C G T A C G T A C T G T A C G G T A C C G T A C G T A C G T A C A G T C T A G
T C A G A G C T A C G T C T A G G A T C C T A G G A T C G T C A C T G A A C G T A C G T