Information for 22-GAACACTCAC (Motif 34)

T C A G G T C A T C G A T G A C G T C A A G T C G C A T T A G C G C T A T G A C
Reverse Opposite:
A C T G C G A T A T C G C G T A T C A G C A G T A C T G A C G T C A G T A G T C
p-value:1e-10
log p-value:-2.512e+01
Information Content per bp:1.539
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.99%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets47.1 +/- 29.7bp
Average Position of motif in Background31.5 +/- 8.2bp
Strand Bias (log2 ratio + to - strand density)1.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GAACACTCAC
AAGCACTTAA
 T C A G G T C A T C G A T G A C G T C A A G T C G C A T T A G C G C T A T G A C
T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GAACACTCAC-
GGACCACCCACG
 A C G T T C A G G T C A T C G A T G A C G T C A A G T C G C A T T A G C G C T A T G A C A C G T
C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GAACACTCAC-
AGCCACTCAAG
 T C A G G T C A T C G A T G A C G T C A A G T C G C A T T A G C G C T A T G A C A C G T
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GAACACTCAC
AASCACTCAA
 T C A G G T C A T C G A T G A C G T C A A G T C G C A T T A G C G C T A T G A C
C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:5
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GAACACTCAC
MRSCACTYAA
 T C A G G T C A T C G A T G A C G T C A A G T C G C A T T A G C G C T A T G A C
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A

Sox5/MA0087.1/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GAACACTCAC
NAACAAT---
 T C A G G T C A T C G A T G A C G T C A A G T C G C A T T A G C G C T A T G A C
G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GAACACTCAC
-AACAAT---
 T C A G G T C A T C G A T G A C G T C A A G T C G C A T T A G C G C T A T G A C
A C G T T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GAACACTCAC
CCAGGAACAG----
 A C G T A C G T A C G T A C G T T C A G G T C A T C G A T G A C G T C A A G T C G C A T T A G C G C T A T G A C
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T

PB0062.1_Sox12_1/Jaspar

Match Rank:9
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----GAACACTCAC
NTTNAGAACAATTA-
 A C G T A C G T A C G T A C G T A C G T T C A G G T C A T C G A T G A C G T C A A G T C G C A T T A G C G C T A T G A C
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A A C G T

PB0072.1_Sox5_1/Jaspar

Match Rank:10
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GAACACTCAC--
TTTAGAACAATAAAAT
 A C G T A C G T A C G T A C G T T C A G G T C A T C G A T G A C G T C A A G T C G C A T T A G C G C T A T G A C A C G T A C G T
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T