Information for 3-KGTGGAGAGAGAGAGA (Motif 33)

C A G T A C T G G C A T C T A G A C T G C T G A C T A G C T G A T C A G C G T A A T C G C T G A C T A G C T G A T C A G G C T A
Reverse Opposite:
C G A T A G T C A G C T A G T C A G C T A T G C G A C T A G T C A G C T A G T C A G C T G T A C G A T C C G T A G T A C G T C A
p-value:1e-11
log p-value:-2.569e+01
Information Content per bp:1.656
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.59%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets37.0 +/- 17.2bp
Average Position of motif in Background67.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1/MA0508.1/Jaspar

Match Rank:1
Score:0.54
Offset:3
Orientation:forward strand
Alignment:KGTGGAGAGAGAGAGA--
---AGAAAGTGAAAGTGA
 C A G T A C T G G C A T C T A G A C T G C T G A C T A G C T G A T C A G C G T A A T C G C T G A C T A G C T G A T C A G G C T A A C G T A C G T
A C G T A C G T A C G T C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A

ZNF354C/MA0130.1/Jaspar

Match Rank:2
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:KGTGGAGAGAGAGAGA
-GTGGAT---------
 C A G T A C T G G C A T C T A G A C T G C T G A C T A G C T G A T C A G C G T A A T C G C T G A C T A G C T G A T C A G G C T A
A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:KGTGGAGAGAGAGAGA
----GAAAGTGAAAGT
 C A G T A C T G G C A T C T A G A C T G C T G A C T A G C T G A T C A G C G T A A T C G C T G A C T A G C T G A T C A G G C T A
A C G T A C G T A C G T A C G T T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T

NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:4
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-KGTGGAGAGAGAGAGA---
NANTGGAAAAANTGAGTCAN
 A C G T C A G T A C T G G C A T C T A G A C T G C T G A C T A G C T G A T C A G C G T A A T C G C T G A C T A G C T G A T C A G G C T A A C G T A C G T A C G T
T A C G C T G A T C G A C G A T C T A G C T A G T C G A C T G A T C G A T C G A C G T A T C G A G C A T C A T G C G T A T A C G G C A T T G A C C G T A A G C T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:5
Score:0.52
Offset:4
Orientation:forward strand
Alignment:KGTGGAGAGAGAGAGA
----GAAAGTGAAAGT
 C A G T A C T G G C A T C T A G A C T G C T G A C T A G C T G A T C A G C G T A A T C G C T G A C T A G C T G A T C A G G C T A
A C G T A C G T A C G T A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:6
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:KGTGGAGAGAGAGAGA
--AGGTGNCAGACAG-
 C A G T A C T G G C A T C T A G A C T G C T G A C T A G C T G A T C A G C G T A A T C G C T G A C T A G C T G A T C A G G C T A
A C G T A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T

GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:7
Score:0.50
Offset:5
Orientation:forward strand
Alignment:KGTGGAGAGAGAGAGA----
-----AGATGKDGAGATAAG
 C A G T A C T G G C A T C T A G A C T G C T G A C T A G C T G A T C A G C G T A A T C G C T G A C T A G C T G A T C A G G C T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A A C T G G T C A A C G T A T C G C A G T C T A G T C A G C G T A A C T G C G T A A C G T C G T A C T G A T A C G

IRF2/MA0051.1/Jaspar

Match Rank:8
Score:0.49
Offset:3
Orientation:forward strand
Alignment:KGTGGAGAGAGAGAGA-----
---GGAAAGCGAAACCAAAAC
 C A G T A C T G G C A T C T A G A C T G C T G A C T A G C T G A T C A G C G T A A T C G C T G A C T A G C T G A T C A G G C T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T C G C T A G C G T A C G T A C G T A C T A G A G C T A C T G C G T A C G T A C G T A A T C G A G T C C T G A C G T A C G T A G C T A G T A C

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:KGTGGAGAGAGAGAGA
-GTGGCGTGACNG---
 C A G T A C T G G C A T C T A G A C T G C T G A C T A G C T G A T C A G C G T A A T C G C T G A C T A G C T G A T C A G G C T A
A C G T T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G A C G T A C G T A C G T

ZNF263/MA0528.1/Jaspar

Match Rank:10
Score:0.48
Offset:0
Orientation:forward strand
Alignment:KGTGGAGAGAGAGAGA-----
GGAGGAGGAGGGGGAGGAGGA
 C A G T A C T G G C A T C T A G A C T G C T G A C T A G C T G A T C A G C G T A A T C G C T G A C T A G C T G A T C A G G C T A A C G T A C G T A C G T A C G T A C G T
C T A G C T A G C T G A C A T G T A C G G C T A C A T G T C A G T C G A T C A G C T A G C T A G C T A G T C A G C T G A C T A G C T A G C T G A C T A G C T A G C T G A