Information for 19-CCAGGTRARR (Motif 31)

A G T C G T A C C G T A C T A G A C T G A C G T C T A G C T G A C T A G C T A G
Reverse Opposite:
A G T C G A T C A G C T A G T C C G T A A G T C A G T C A C G T A C T G C T A G
p-value:1e-12
log p-value:-2.764e+01
Information Content per bp:1.799
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.12%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets49.4 +/- 21.9bp
Average Position of motif in Background18.7 +/- 10.1bp
Strand Bias (log2 ratio + to - strand density)-1.1
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:1
Score:0.80
Offset:0
Orientation:forward strand
Alignment:CCAGGTRARR
VCAGGTRDRY
 A G T C G T A C C G T A C T A G A C T G A C G T C T A G C T G A C T A G C T A G
T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C

ZEB1/MA0103.2/Jaspar

Match Rank:2
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:CCAGGTRARR
-CAGGTGAGG
 A G T C G T A C C G T A C T A G A C T G A C G T C T A G C T G A C T A G C T A G
A C G T A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.79
Offset:1
Orientation:forward strand
Alignment:CCAGGTRARR--
-CAGGTAAGTAT
 A G T C G T A C C G T A C T A G A C T G A C G T C T A G C T G A C T A G C T A G A C G T A C G T
A C G T T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-CCAGGTRARR
NNCAGGTGNN-
 A C G T A G T C G T A C C G T A C T A G A C T G A C G T C T A G C T G A C T A G C T A G
C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T

FIGLA/MA0820.1/Jaspar

Match Rank:5
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-CCAGGTRARR
AACAGGTGNT-
 A C G T A G T C G T A C C G T A C T A G A C T G A C G T C T A G C T G A C T A G C T A G
G C T A T G C A G T A C G C T A A T C G A T C G C A G T C T A G C A T G C G A T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:6
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----CCAGGTRARR---
TATTCAAGGTCATGCGA
 A C G T A C G T A C G T A C G T A G T C G T A C C G T A C T A G A C T G A C G T C T A G C T G A C T A G C T A G A C G T A C G T A C G T
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

TCF4/MA0830.1/Jaspar

Match Rank:7
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-CCAGGTRARR
NNCAGGTGCG-
 A C G T A G T C G T A C C G T A C T A G A C T G A C G T C T A G C T G A C T A G C T A G
G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-CCAGGTRARR
TCAAGGTCAN-
 A C G T A G T C G T A C C G T A C T A G A C T G A C G T C T A G C T G A C T A G C T A G
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:9
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--CCAGGTRARR
BTCAAGGTCA--
 A C G T A C G T A G T C G T A C C G T A C T A G A C T G A C G T C T A G C T G A C T A G C T A G
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:10
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-CCAGGTRARR
TCAAGGTCAT-
 A C G T A G T C G T A C C G T A C T A G A C T G A C G T C T A G C T G A C T A G C T A G
G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T