Information for 18-GAAACNCTCAAGT (Motif 27)

A C T G C G T A G T C A C G T A G A T C A T G C G A T C C G A T T G A C C G T A C T G A A T C G A C G T
Reverse Opposite:
G T C A A T G C G A C T A C G T A C T G C G T A C T A G T A C G C T A G G C A T A C G T G A C T G T A C
p-value:1e-13
log p-value:-3.177e+01
Information Content per bp:1.703
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.86%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets37.1 +/- 24.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0111.1_Nkx2-2/Jaspar

Match Rank:1
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:GAAACNCTCAAGT------
--NANTTTCAAGTGGTTAN
 A C T G C G T A G T C A C G T A G A T C A T G C G A T C C G A T T G A C C G T A C T G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T

NKX2-8/MA0673.1/Jaspar

Match Rank:2
Score:0.66
Offset:6
Orientation:reverse strand
Alignment:GAAACNCTCAAGT--
------NTCAAGTGG
 A C T G C G T A G T C A C G T A G A T C A T G C G A T C C G A T T G A C C G T A C T G A A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G

NKX2-3/MA0672.1/Jaspar

Match Rank:3
Score:0.63
Offset:6
Orientation:reverse strand
Alignment:GAAACNCTCAAGT---
------NTCAAGTGGN
 A C T G C G T A G T C A C G T A G A T C A T G C G A T C C G A T T G A C C G T A C T G A A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T

PH0171.1_Nkx2-1/Jaspar

Match Rank:4
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GAAACNCTCAAGT------
---AANTTCAAGTGGCTTN
 A C T G C G T A G T C A C G T A G A T C A T G C G A T C C G A T T G A C C G T A C T G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A

PH0113.1_Nkx2-4/Jaspar

Match Rank:5
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GAAACNCTCAAGT------
---AATTTCAAGTGGCTTN
 A C T G C G T A G T C A C G T A G A T C A T G C G A T C C G A T T G A C C G T A C T G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A C G T A C G A T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G A G T C G C A T G A C T C G T A

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GAAACNCTCAAGT
-AGCCACTCAAG-
 A C T G C G T A G T C A C G T A G A T C A T G C G A T C C G A T T G A C C G T A C T G A A T C G A C G T
A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T

PH0114.1_Nkx2-5/Jaspar

Match Rank:7
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GAAACNCTCAAGT------
---AAATTCAAGTGGNTTN
 A C T G C G T A G T C A C G T A G A T C A T G C G A T C C G A T T G A C C G T A C T G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A

PH0115.1_Nkx2-6/Jaspar

Match Rank:8
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GAAACNCTCAAGT------
---AATNTTAAGTGGNTNN
 A C T G C G T A G T C A C G T A G A T C A T G C G A T C C G A T T G A C C G T A C T G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A C T G A C G A T A C T G G C A T A G C T C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T G C T A

SPI1/MA0080.4/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GAAACNCTCAAGT-
AAAAAGCGGAAGTA
 A C T G C G T A G T C A C G T A G A T C A T G C G A T C C G A T T G A C C G T A C T G A A T C G A C G T A C G T
T C G A C T G A C G T A C G T A C G T A T A C G T G A C C T A G A T C G G T C A C G T A A T C G G A C T C G T A

ELF3/MA0640.1/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GAAACNCTCAAGT--
--AACCCGGAAGTAA
 A C T G C G T A G T C A C G T A G A T C A T G C G A T C C G A T T G A C C G T A C T G A A T C G A C G T A C G T A C G T
A C G T A C G T G C T A G C T A T A G C T A G C T G A C C T A G A C T G T C G A G C T A C T A G G A C T C T G A C T G A