Information for 5-AHCTCTGCCATCTGAC (Motif 6)

C G T A G T A C A G T C A C G T A T G C A C G T A C T G A T G C A G T C G T C A A C G T A G T C A G C T A T C G G C T A A G T C
Reverse Opposite:
C T A G C G A T A T G C C T G A T C A G C G T A A C G T C T A G A T C G G T A C C G T A A T C G C G T A A C T G C A T G A C G T
p-value:1e-14
log p-value:-3.278e+01
Information Content per bp:1.808
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.7 +/- 34.2bp
Average Position of motif in Background46.2 +/- 22.8bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AHCTCTGCCATCTGAC----
GCCTCCTCCMTCWGACTGKS
 C G T A G T A C A G T C A C G T A T G C A C G T A C T G A T G C A G T C G T C A A C G T A G T C A G C T A T C G G C T A A G T C A C G T A C G T A C G T A C G T
T A C G G A T C G A T C G A C T A G T C A G T C G C A T A G T C A G T C G T A C A G C T A G T C G C T A T C A G C T G A A G T C G A C T T A C G A C T G T A G C

NR2C2/MA0504.1/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--AHCTCTGCCATCTGAC
TGACCTCTGACCCCN---
 A C G T A C G T C G T A G T A C A G T C A C G T A T G C A C G T A C T G A T G C A G T C G T C A A C G T A G T C A G C T A T C G G C T A A G T C
G A C T T C A G T G C A G T A C A G T C A G C T A G T C G A C T T A C G G T C A G T A C T G A C A G T C A G T C A C G T A C G T A C G T A C G T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:3
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--AHCTCTGCCATCTGAC
TGACCTTTGACCTC----
 A C G T A C G T C G T A G T A C A G T C A C G T A T G C A C G T A C T G A T G C A G T C G T C A A C G T A G T C A G C T A T C G G C T A A G T C
G A C T T A C G T G C A G T A C G A T C A G C T G A C T G A C T T A C G T G C A G T A C G A T C G A C T A G T C A C G T A C G T A C G T A C G T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AHCTCTGCCATCTGAC-
--GYCTGGYYTNTGTCA
 C G T A G T A C A G T C A C G T A T G C A C G T A C T G A T G C A G T C G T C A A C G T A G T C A G C T A T C G G C T A A G T C A C G T
A C G T A C G T A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AHCTCTGCCATCTGAC
TGACCTTTGCCCTA----
 A C G T A C G T C G T A G T A C A G T C A C G T A T G C A C G T A C T G A T G C A G T C G T C A A C G T A G T C A G C T A T C G G C T A A G T C
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A A C G T A C G T A C G T A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AHCTCTGCCATCTGAC
TGACCTTTGCCCTAN---
 A C G T A C G T C G T A G T A C A G T C A C G T A T G C A C G T A C T G A T G C A G T C G T C A A C G T A G T C A G C T A T C G G C T A A G T C
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:AHCTCTGCCATCTGAC
----CTGACCTTTG--
 C G T A G T A C A G T C A C G T A T G C A C G T A C T G A T G C A G T C G T C A A C G T A G T C A G C T A T C G G C T A A G T C
A C G T A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AHCTCTGCCATCTGAC
-GGTCTGGCAT-----
 C G T A G T A C A G T C A C G T A T G C A C G T A C T G A T G C A G T C G T C A A C G T A G T C A G C T A T C G G C T A A G T C
A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T A C G T A C G T A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AHCTCTGCCATCTGAC
TGACCTTTGCCCCA----
 A C G T A C G T C G T A G T A C A G T C A C G T A T G C A C G T A C T G A T G C A G T C G T C A A C G T A G T C A G C T A T C G G C T A A G T C
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A A C G T A C G T A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--AHCTCTGCCATCTGAC
TGGACTTTGNNCTNTG--
 A C G T A C G T C G T A G T A C A G T C A C G T A T G C A C G T A C T G A T G C A G T C G T C A A C G T A G T C A G C T A T C G G C T A A G T C
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G A C G T A C G T