Information for 4-ATTWATCTAATTCCAT (Motif 5)

G T C A A C G T A C G T C G T A C T G A C A G T A G T C A G C T C G T A T G C A A C G T A C G T G A T C G A T C C T G A A C G T
Reverse Opposite:
C G T A A G C T C A T G C A T G T G C A G T C A A C G T C G A T C T G A C T A G G C T A A G C T C G A T G T C A G T C A C A G T
p-value:1e-14
log p-value:-3.281e+01
Information Content per bp:1.709
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.4 +/- 26.5bp
Average Position of motif in Background49.9 +/- 18.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PHOX2A/MA0713.1/Jaspar

Match Rank:1
Score:0.63
Offset:2
Orientation:forward strand
Alignment:ATTWATCTAATTCCAT
--TAATTTAATTA---
 G T C A A C G T A C G T C G T A C T G A C A G T A G T C A G C T C G T A T G C A A C G T A C G T G A T C G A T C C T G A A C G T
A C G T A C G T G C A T C T G A C T G A G A C T A G C T G A C T T C G A T C G A A G C T G C A T C G T A A C G T A C G T A C G T

PROP1/MA0715.1/Jaspar

Match Rank:2
Score:0.63
Offset:2
Orientation:forward strand
Alignment:ATTWATCTAATTCCAT
--TAATTTAATTA---
 G T C A A C G T A C G T C G T A C T G A C A G T A G T C A G C T C G T A T G C A A C G T A C G T G A T C G A T C C T G A A C G T
A C G T A C G T G C A T C G T A C T G A G C A T G A C T C G A T G T C A C T G A C G A T G A C T C G T A A C G T A C G T A C G T

Phox2b/MA0681.1/Jaspar

Match Rank:3
Score:0.63
Offset:2
Orientation:forward strand
Alignment:ATTWATCTAATTCCAT
--TAATTTAATTA---
 G T C A A C G T A C G T C G T A C T G A C A G T A G T C A G C T C G T A T G C A A C G T A C G T G A T C G A T C C T G A A C G T
A C G T A C G T G C A T C T G A T C G A G A C T A G C T G A C T T C G A T C G A A G C T G C A T C G T A A C G T A C G T A C G T

Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:4
Score:0.58
Offset:2
Orientation:forward strand
Alignment:ATTWATCTAATTCCAT
--TAATCHGATTAC--
 G T C A A C G T A C G T C G T A C T G A C A G T A G T C A G C T C G T A T G C A A C G T A C G T G A T C G A T C C T G A A C G T
A C G T A C G T G C A T C T G A T G C A G A C T A G T C G T A C T C A G C G T A A G C T A C G T G C T A G T A C A C G T A C G T

Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:ATTWATCTAATTCCAT
-YTAATYNRATTA---
 G T C A A C G T A C G T C G T A C T G A C A G T A G T C A G C T C G T A T G C A A C G T A C G T G A T C G A T C C T G A A C G T
A C G T G A T C G C A T C T G A C G T A A G C T A G C T C G T A T C G A C T G A A C G T G C A T C G T A A C G T A C G T A C G T

PH0093.1_Lhx3/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---ATTWATCTAATTCCAT
NNTATTTAATTAATTNN--
 A C G T A C G T A C G T G T C A A C G T A C G T C G T A C T G A C A G T A G T C A G C T C G T A T G C A A C G T A C G T G A T C G A T C C T G A A C G T
T G C A C A G T C A G T G C T A G C A T G A C T G A C T C T G A C G T A C G A T A G C T C T G A C T G A A G C T C A G T G C A T A T G C A C G T A C G T

PH0095.1_Lhx5/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---ATTWATCTAATTCCAT
ANNATTTAATTAATTNN--
 A C G T A C G T A C G T G T C A A C G T A C G T C G T A C T G A C A G T A G T C A G C T C G T A T G C A A C G T A C G T G A T C G A T C C T G A A C G T
T C G A C A T G C A G T C G T A C G A T G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G A C T C A G T G A T C A T C G A C G T A C G T

Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer

Match Rank:8
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:ATTWATCTAATTCCAT
--TAATTNVATTAN--
 G T C A A C G T A C G T C G T A C T G A C A G T A G T C A G C T C G T A T G C A A C G T A C G T G A T C G A T C C T G A A C G T
A C G T A C G T G C A T C T G A C G T A A G C T A C G T G T A C T C G A C T G A A C G T G A C T C G T A C A T G A C G T A C G T

PH0103.1_Meox1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:ATTWATCTAATTCCAT-
-CTGAGGTAATTACCNC
 G T C A A C G T A C G T C G T A C T G A C A G T A G T C A G C T C G T A T G C A A C G T A C G T G A T C G A T C C T G A A C G T A C G T
A C G T G A T C C G A T T C A G C T G A C A T G T A C G G A C T T G C A G C T A C A G T A C G T C T G A G T A C G T A C A C G T A G T C

PB0169.1_Sox15_2/Jaspar

Match Rank:10
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:ATTWATCTAATTCCAT----
-----TNGAATTTCATTNAN
 G T C A A C G T A C G T C G T A C T G A C A G T A G T C A G C T C G T A T G C A A C G T A C G T G A T C G A T C C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A T G C C T A G C T G A G T C A G A C T C A G T G C A T T G A C C T G A C A G T G A C T A G T C T G C A T G C A