Information for 11-TCAGTGAGCBCGC (Motif 25)

A C G T A G T C C G T A T A C G A C G T A C T G G T C A A T C G A G T C A C G T A G T C C T A G A G T C
Reverse Opposite:
C T A G A G T C A C T G T C G A C T A G A T G C A C G T G T A C C G T A A T G C C G A T C T A G C G T A
p-value:1e-8
log p-value:-2.010e+01
Information Content per bp:1.800
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.8 +/- 24.1bp
Average Position of motif in Background44.6 +/- 8.9bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:1
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TCAGTGAGCBCGC
AGGTCANTGACCTN--
 A C G T A C G T A C G T A C G T A G T C C G T A T A C G A C G T A C T G G T C A A T C G A G T C A C G T A G T C C T A G A G T C
T C G A C A T G C A T G A C G T A T G C T C G A C T G A A G C T T A C G T G C A G T A C G A T C A G C T A G T C A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:2
Score:0.55
Offset:6
Orientation:forward strand
Alignment:TCAGTGAGCBCGC-
------AGCGCGCC
 A C G T A G T C C G T A T A C G A C G T A C T G G T C A A T C G A G T C A C G T A G T C C T A G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C

GLI2/MA0734.1/Jaspar

Match Rank:3
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:TCAGTGAGCBCGC
-CAGTGTGGTCGC
 A C G T A G T C C G T A T A C G A C G T A C T G G T C A A T C G A G T C A C G T A G T C C T A G A G T C
A C G T G A T C G C T A C A T G A C G T A T C G C A G T T A C G C T A G A C G T G T A C A C T G G A T C

PB0008.1_E2F2_1/Jaspar

Match Rank:4
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:TCAGTGAGCBCGC------
----NTCGCGCGCCTTNNN
 A C G T A G T C C G T A T A C G A C G T A C T G G T C A A T C G A G T C A C G T A G T C C T A G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C G A T A T G C C T A G T A G C A T C G A T G C A C T G A T G C A T G C G A C T C G A T G C A T C G T A A G C T

PB0009.1_E2F3_1/Jaspar

Match Rank:5
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:TCAGTGAGCBCGC------
----ANCGCGCGCCCTTNN
 A C G T A G T C C G T A T A C G A C G T A C T G G T C A A T C G A G T C A C G T A G T C C T A G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:6
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----TCAGTGAGCBCGC--
NGAGGTCANNGAGTTCANNN
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A T A C G A C G T A C T G G T C A A T C G A G T C A C G T A G T C C T A G A G T C A C G T A C G T
C T G A T C A G C T G A C T A G C A T G A C G T A T G C C G T A A T G C G C A T T C A G C T G A A C T G A C G T C A G T A G T C C G T A C A G T C T A G C A T G

POL002.1_INR/Jaspar

Match Rank:7
Score:0.51
Offset:0
Orientation:forward strand
Alignment:TCAGTGAGCBCGC
TCAGTCTT-----
 A C G T A G T C C G T A T A C G A C G T A C T G G T C A A T C G A G T C A C G T A G T C C T A G A G T C
C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T A C G T A C G T A C G T A C G T

PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer

Match Rank:8
Score:0.51
Offset:-8
Orientation:reverse strand
Alignment:--------TCAGTGAGCBCGC
TTTMCGCTTSABTGAACACN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A T A C G A C G T A C T G G T C A A T C G A G T C A C G T A G T C C T A G A G T C
A G C T C A G T G A C T T G A C G A T C T C A G A T G C G C A T A G C T T A C G C T G A A T C G G A C T C T A G T G C A T C G A A G T C G C T A A T G C T C G A A C G T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--TCAGTGAGCBCGC
RGTTAGTGCCCY---
 A C G T A C G T A C G T A G T C C G T A T A C G A C G T A C T G G T C A A T C G A G T C A C G T A G T C C T A G A G T C
C T G A C T A G A C G T G A C T G T C A A C T G A G C T A C T G A T G C G T A C G T A C A G C T A C G T A C G T A C G T

Vdr/MA0693.1/Jaspar

Match Rank:10
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----TCAGTGAGCBCGC
GAGTTCATTGAGTTCA-
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A T A C G A C G T A C T G G T C A A T C G A G T C A C G T A G T C C T A G A G T C
T C A G T C G A C A T G A C G T A C G T A G T C C T G A G A C T G A C T T C A G T C G A C T A G A C G T A C G T A G T C C T G A A C G T