Information for 12-CYTGSTSTCCWGCTGW (Motif 14)

A G T C A G T C A C G T A C T G A T C G A C G T A T G C A C G T A G T C A G T C C G T A A C T G A G T C A C G T A C T G C G T A
Reverse Opposite:
C G A T A G T C C G T A A C T G A G T C G C A T A C T G A C T G C G T A A T C G G T C A A T G C G T A C C G T A C T A G A C T G
p-value:1e-11
log p-value:-2.556e+01
Information Content per bp:1.869
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.0 +/- 17.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:1
Score:0.68
Offset:3
Orientation:forward strand
Alignment:CYTGSTSTCCWGCTGW--
---GGCCYCCTGCTGDGH
 A G T C A G T C A C G T A C T G A T C G A C G T A T G C A C G T A G T C A G T C C G T A A C T G A G T C A C G T A C T G C G T A A C G T A C G T
A C G T A C G T A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

PB0205.1_Zic1_2/Jaspar

Match Rank:2
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:CYTGSTSTCCWGCTGW----
-----TNTCCTGCTGTGNNG
 A G T C A G T C A C G T A C T G A T C G A C G T A T G C A C G T A G T C A G T C C G T A A C T G A G T C A C G T A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

PB0207.1_Zic3_2/Jaspar

Match Rank:3
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:CYTGSTSTCCWGCTGW----
-----NNTCCTGCTGTGNNN
 A G T C A G T C A C G T A C T G A T C G A C G T A T G C A C G T A G T C A G T C C G T A A C T G A G T C A C G T A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:CYTGSTSTCCWGCTGW-
-----CCCCCTGCTGTG
 A G T C A G T C A C G T A C T G A T C G A C G T A T G C A C G T A G T C A G T C C G T A A C T G A G T C A C G T A C T G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

PB0206.1_Zic2_2/Jaspar

Match Rank:5
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:CYTGSTSTCCWGCTGW----
-----TCNCCTGCTGNGNNN
 A G T C A G T C A C G T A C T G A T C G A C G T A T G C A C G T A G T C A G T C C G T A A C T G A G T C A C G T A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:6
Score:0.63
Offset:8
Orientation:reverse strand
Alignment:CYTGSTSTCCWGCTGW--
--------CCAGCTGTTN
 A G T C A G T C A C G T A C T G A T C G A C G T A T G C A C G T A G T C A G T C C G T A A C T G A G T C A C G T A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:7
Score:0.63
Offset:8
Orientation:forward strand
Alignment:CYTGSTSTCCWGCTGW--
--------CCTGCTGAGH
 A G T C A G T C A C G T A C T G A T C G A C G T A T G C A C G T A G T C A G T C C G T A A C T G A G T C A C G T A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:8
Score:0.62
Offset:8
Orientation:reverse strand
Alignment:CYTGSTSTCCWGCTGW--
--------HCAGCTGDTN
 A G T C A G T C A C G T A C T G A T C G A C G T A T G C A C G T A G T C A G T C C G T A A C T G A G T C A C G T A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T

Tcf12/MA0521.1/Jaspar

Match Rank:9
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:CYTGSTSTCCWGCTGW-
------NNGCAGCTGTT
 A G T C A G T C A C G T A C T G A T C G A C G T A T G C A C G T A G T C A G T C C G T A A C T G A G T C A C G T A C T G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T

Myog/MA0500.1/Jaspar

Match Rank:10
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:CYTGSTSTCCWGCTGW-
------NNGCAGCTGTC
 A G T C A G T C A C G T A C T G A T C G A C G T A T G C A C G T A G T C A G T C C G T A A C T G A G T C A C G T A C T G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C