Information for 8-CCWAATGCAGATGAAM (Motif 8)

A G T C A G T C C G A T G T C A G C T A C A G T A C T G A G T C C G T A A C T G C T G A A C G T C T A G C G T A G T C A G T C A
Reverse Opposite:
A C G T A C G T A C G T A G T C C G T A A G C T T A G C C G A T A C T G A G T C G T C A C G A T A C G T C G T A C T A G C T A G
p-value:1e-13
log p-value:-3.149e+01
Information Content per bp:1.745
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets20.7 +/- 5.7bp
Average Position of motif in Background59.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU2F2/MA0507.1/Jaspar

Match Rank:1
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CCWAATGCAGATGAAM
--ATATGCAAATNNN-
 A G T C A G T C C G A T G T C A G C T A C A G T A C T G A G T C C G T A A C T G C T G A A C G T C T A G C G T A G T C A G T C A
A C G T A C G T C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CCWAATGCAGATGAAM
---WATGCAAATGAG-
 A G T C A G T C C G A T G T C A G C T A C A G T A C T G A G T C C G T A A C T G C T G A A C G T C T A G C G T A G T C A G T C A
A C G T A C G T A C G T G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G A C G T

PH0144.1_Pou2f2/Jaspar

Match Rank:3
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CCWAATGCAGATGAAM
TTGTATGCAAATTAGA
 A G T C A G T C C G A T G T C A G C T A C A G T A C T G A G T C C G T A A C T G C T G A A C G T C T A G C G T A G T C A G T C A
A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A

PB0208.1_Zscan4_2/Jaspar

Match Rank:4
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CCWAATGCAGATGAAM--
--CGAAGCACACAAAATA
 A G T C A G T C C G A T G T C A G C T A C A G T A C T G A G T C C G T A A C T G C T G A A C G T C T A G C G T A G T C A G T C A A C G T A C G T
A C G T A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

Id2/MA0617.1/Jaspar

Match Rank:5
Score:0.57
Offset:6
Orientation:forward strand
Alignment:CCWAATGCAGATGAAM
------GCACGTGA--
 A G T C A G T C C G A T G T C A G C T A C A G T A C T G A G T C C G T A A C T G C T G A A C G T C T A G C G T A G T C A G T C A
A C G T A C G T A C G T A C G T A C G T A C G T T C A G A G T C C G T A A G T C A C T G A C G T A C T G C T G A A C G T A C G T

USF1/MA0093.2/Jaspar

Match Rank:6
Score:0.57
Offset:5
Orientation:forward strand
Alignment:CCWAATGCAGATGAAM
-----GCCACGTGACC
 A G T C A G T C C G A T G T C A G C T A C A G T A C T G A G T C C G T A A C T G C T G A A C G T C T A G C G T A G T C A G T C A
A C G T A C G T A C G T A C G T A C G T T C A G A G T C G T A C C G T A A G T C T C A G A C G T A C T G C T G A A G T C G A T C

TFEC/MA0871.1/Jaspar

Match Rank:7
Score:0.57
Offset:5
Orientation:forward strand
Alignment:CCWAATGCAGATGAAM
-----ATCACGTGAC-
 A G T C A G T C C G A T G T C A G C T A C A G T A C T G A G T C C G T A A C T G C T G A A C G T C T A G C G T A G T C A G T C A
A C G T A C G T A C G T A C G T A C G T T C G A C A G T G T A C C G T A A G T C T C A G G A C T A C T G T C G A A G T C A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.56
Offset:5
Orientation:forward strand
Alignment:CCWAATGCAGATGAAM
-----ANCAGCTG---
 A G T C A G T C C G A T G T C A G C T A C A G T A C T G A G T C C G T A A C T G C T G A A C G T C T A G C G T A G T C A G T C A
A C G T A C G T A C G T A C G T A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T A C G T

Pou2f3/MA0627.1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CCWAATGCAGATGAAM
TTGTATGCAAATTAGA
 A G T C A G T C C G A T G T C A G C T A C A G T A C T G A G T C C G T A A C T G C T G A A C G T C T A G C G T A G T C A G T C A
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A

PH0145.1_Pou2f3/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CCWAATGCAGATGAAM
TTGTATGCAAATTAGA
 A G T C A G T C C G A T G T C A G C T A C A G T A C T G A G T C C G T A A C T G C T G A A C G T C T A G C G T A G T C A G T C A
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A