Information for 14-TGCCASCTAGGAT (Motif 30)

C G A T T C A G A T G C A G T C G C T A A T C G A G T C A C G T C T G A C A T G T A C G G T C A A C G T
Reverse Opposite:
T C G A A C G T A G T C G T A C G A C T C G T A C T A G T A G C C A G T C T A G A T C G A G T C C G T A
p-value:1e-7
log p-value:-1.669e+01
Information Content per bp:1.703
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.72%
Number of Background Sequences with motif284.5
Percentage of Background Sequences with motif0.61%
Average Position of motif in Targets45.1 +/- 27.0bp
Average Position of motif in Background48.0 +/- 32.0bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hic1/MA0739.1/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TGCCASCTAGGAT
ATGCCAACC-----
 A C G T C G A T T C A G A T G C A G T C G C T A A T C G A G T C A C G T C T G A C A T G T A C G G T C A A C G T
T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T A C G T A C G T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TGCCASCTAGGAT
TGACACCT-----
 C G A T T C A G A T G C A G T C G C T A A T C G A G T C A C G T C T G A C A T G T A C G G T C A A C G T
G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T A C G T A C G T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TGCCASCTAGGAT
TGTCANYT-----
 C G A T T C A G A T G C A G T C G C T A A T C G A G T C A C G T C T G A C A T G T A C G G T C A A C G T
A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T A C G T A C G T A C G T A C G T A C G T

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGCCASCTAGGAT
NNVCAGCTGB---
 C G A T T C A G A T G C A G T C G C T A A T C G A G T C A C G T C T G A C A T G T A C G G T C A A C G T
C A T G T C A G T G A C G T A C G T C A T A C G T A G C G C A T T A C G A C T G A C G T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TGCCASCTAGGAT
-NVCAGCTGBBNN
 C G A T T C A G A T G C A G T C G C T A A T C G A G T C A C G T C T G A C A T G T A C G G T C A A C G T
A C G T T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C

PH0169.1_Tgif1/Jaspar

Match Rank:6
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----TGCCASCTAGGAT
GATATTGACAGCTGCGT-
 A C G T A C G T A C G T A C G T A C G T C G A T T C A G A T G C A G T C G C T A A T C G A G T C A C G T C T G A C A T G T A C G G T C A A C G T
C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:7
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----TGCCASCTAGGAT
ACTATGCCAACCTACC-
 A C G T A C G T A C G T A C G T C G A T T C A G A T G C A G T C G C T A A T C G A G T C A C G T C T G A C A T G T A C G G T C A A C G T
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:8
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TGCCASCTAGGAT
--CCAGCTGTTN-
 C G A T T C A G A T G C A G T C G C T A A T C G A G T C A C G T C T G A C A T G T A C G G T C A A C G T
A C G T A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A A C G T

PB0181.1_Spdef_2/Jaspar

Match Rank:9
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TGCCASCTAGGAT------
---CTACTAGGATGTNNTN
 C G A T T C A G A T G C A G T C G C T A A T C G A G T C A C G T C T G A C A T G T A C G G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:10
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TGCCASCTAGGAT
-GCCATCTGTT--
 C G A T T C A G A T G C A G T C G C T A A T C G A G T C A C G T C T G A C A T G T A C G G T C A A C G T
A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T