Information for 18-YCTYCASAMWSAMCAM (Motif 27)

A G C T A G T C A C G T A G T C A G T C C G T A A T G C C G T A G T A C C G T A A T G C C G T A T G A C A G T C C G T A G T A C
Reverse Opposite:
C A G T A C G T A C T G A C G T A C G T A T C G G C A T A C T G A C G T T A C G A C G T A C T G C T A G C G T A A C T G C T G A
p-value:1e-8
log p-value:-2.008e+01
Information Content per bp:1.793
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.8 +/- 34.6bp
Average Position of motif in Background78.8 +/- 3.2bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0060.1_Smad3_1/Jaspar

Match Rank:1
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--YCTYCASAMWSAMCAM
CAAATCCAGACATCACA-
 A C G T A C G T A G C T A G T C A C G T A G T C A G T C C G T A A T G C C G T A G T A C C G T A A T G C C G T A T G A C A G T C C G T A G T A C
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:2
Score:0.52
Offset:1
Orientation:forward strand
Alignment:YCTYCASAMWSAMCAM
-ATCCAC---------
 A G C T A G T C A C G T A G T C A G T C C G T A A T G C C G T A G T A C C G T A A T G C C G T A T G A C A G T C C G T A G T A C
A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0093.1_Zfp105_1/Jaspar

Match Rank:3
Score:0.52
Offset:4
Orientation:forward strand
Alignment:YCTYCASAMWSAMCAM---
----AACAAACAACAAGAG
 A G C T A G T C A C G T A G T C A G T C C G T A A T G C C G T A G T A C C G T A A T G C C G T A T G A C A G T C C G T A G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

TBX20/MA0689.1/Jaspar

Match Rank:4
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:YCTYCASAMWSAMCAM
-CTTCACACCTA----
 A G C T A G T C A C G T A G T C A G T C C G T A A T G C C G T A G T A C C G T A A T G C C G T A T G A C A G T C C G T A G T A C
A C G T A G T C G C A T G C A T G T A C G T C A T G A C G T C A G T A C A G T C G A C T G C T A A C G T A C G T A C G T A C G T

MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer

Match Rank:5
Score:0.51
Offset:0
Orientation:forward strand
Alignment:YCTYCASAMWSAMCAM----
WNTGCTGASTCAGCANWTTY
 A G C T A G T C A C G T A G T C A G T C C G T A A T G C C G T A G T A C C G T A A T G C C G T A T G A C A G T C C G T A G T A C A C G T A C G T A C G T A C G T
C G T A G A C T C G A T A T C G G T A C G C A T C A T G C G T A T A C G G C A T G T A C C G T A C A T G A T G C G C T A C T A G G C A T G C A T G C A T G A C T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:YCTYCASAMWSAMCAM
---CCAGACAG-----
 A G C T A G T C A C G T A G T C A G T C C G T A A T G C C G T A G T A C C G T A A T G C C G T A T G A C A G T C C G T A G T A C
A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:7
Score:0.49
Offset:0
Orientation:forward strand
Alignment:YCTYCASAMWSAMCAM
GCTTCC----------
 A G C T A G T C A C G T A G T C A G T C C G T A A T G C C G T A G T A C C G T A A T G C C G T A T G A C A G T C C G T A G T A C
A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MAFG/MA0659.1/Jaspar

Match Rank:8
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--YCTYCASAMWSAMCAM---
AATNTGCTGACTCAGCANTTT
 A C G T A C G T A G C T A G T C A C G T A G T C A G T C C G T A A T G C C G T A G T A C C G T A A T G C C G T A T G A C A G T C C G T A G T A C A C G T A C G T A C G T
C G T A C G T A G C A T C G T A G A C T T A C G G T A C G A C T C A T G G T C A T A G C C G A T G T A C C T G A C A T G A T G C C T G A G C T A C G A T G C A T G C A T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:YCTYCASAMWSAMCAM
---CCAGACRSVB---
 A G C T A G T C A C G T A G T C A G T C C G T A A T G C C G T A G T A C C G T A A T G C C G T A T G A C A G T C C G T A G T A C
A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T A C G T

MAFK/MA0496.1/Jaspar

Match Rank:10
Score:0.49
Offset:4
Orientation:forward strand
Alignment:YCTYCASAMWSAMCAM---
----CTGAGTCAGCAATTT
 A G C T A G T C A C G T A G T C A G T C C G T A A T G C C G T A G T A C C G T A A T G C C G T A T G A C A G T C C G T A G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T