Information for 3-TTTACCACYAGRGGGC (Motif 2)

G A C T G A C T A G C T T G C A A T G C G T A C G T C A A T G C G A C T C T G A A C T G C T A G C T A G C T A G A T C G G T A C
Reverse Opposite:
A C T G A T G C A G T C G A T C A G T C G T A C G A C T C T G A A T C G C A G T A C T G T A C G A C G T T C G A C T G A C T G A
p-value:1e-16
log p-value:-3.881e+01
Information Content per bp:1.598
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif4.35%
Number of Background Sequences with motif280.0
Percentage of Background Sequences with motif0.60%
Average Position of motif in Targets48.6 +/- 25.1bp
Average Position of motif in Background49.1 +/- 26.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF/MA0139.1/Jaspar

Match Rank:1
Score:0.86
Offset:1
Orientation:forward strand
Alignment:TTTACCACYAGRGGGC----
-TGGCCACCAGGGGGCGCTA
 G A C T G A C T A G C T T G C A A T G C G T A C G T C A A T G C G A C T C T G A A C T G C T A G C T A G C T A G A T C G G T A C A C G T A C G T A C G T A C G T
A C G T G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.86
Offset:1
Orientation:reverse strand
Alignment:TTTACCACYAGRGGGC-----
-TGGCCACCAGGTGGCACTNT
 G A C T G A C T A G C T T G C A A T G C G T A C G T C A A T G C G A C T C T G A A C T G C T A G C T A G C T A G A T C G G T A C A C G T A C G T A C G T A C G T A C G T
A C G T G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.84
Offset:3
Orientation:reverse strand
Alignment:TTTACCACYAGRGGGC-------
---GCCASCAGGGGGCGCYVNNG
 G A C T G A C T A G C T T G C A A T G C G T A C G T C A A T G C G A C T C T G A A C T G C T A G C T A G C T A G A T C G G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

PB0101.1_Zic1_1/Jaspar

Match Rank:4
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TTTACCACYAGRGGGC
--CACCCCCGGGGGGG
 G A C T G A C T A G C T T G C A A T G C G T A C G T C A A T G C G A C T C T G A A C T G C T A G C T A G C T A G A T C G G T A C
A C G T A C G T A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G

PB0103.1_Zic3_1/Jaspar

Match Rank:5
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TTTACCACYAGRGGGC-
--CCCCCCCGGGGGGGT
 G A C T G A C T A G C T T G C A A T G C G T A C G T C A A T G C G A C T C T G A A C T G C T A G C T A G C T A G A T C G G T A C A C G T
A C G T A C G T A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G T A C G A C T G C A T G C A T G C A T G A T C G A G C T

ZIC4/MA0751.1/Jaspar

Match Rank:6
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TTTACCACYAGRGGGC-
--NCNCAGCGGGGGGTC
 G A C T G A C T A G C T T G C A A T G C G T A C G T C A A T G C G A C T C T G A A C T G C T A G C T A G C T A G A T C G G T A C A C G T
A C G T A C G T C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C

PB0102.1_Zic2_1/Jaspar

Match Rank:7
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TTTACCACYAGRGGGC-
--CCCCCCCGGGGGGGT
 G A C T G A C T A G C T T G C A A T G C G T A C G T C A A T G C G A C T C T G A A C T G C T A G C T A G C T A G A T C G G T A C A C G T
A C G T A C G T A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G A T C G A C T G C A T G C A T G C A T G A T C G A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:8
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:TTTACCACYAGRGGGC------
-----NNNAAGGGGGCGGGNNN
 G A C T G A C T A G C T T G C A A T G C G T A C G T C A A T G C G A C T C T G A A C T G C T A G C T A G C T A G A T C G G T A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:9
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TTTACCACYAGRGGGC-
--DCHCAGCAGGRGGCC
 G A C T G A C T A G C T T G C A A T G C G T A C G T C A A T G C G A C T C T G A A C T G C T A G C T A G C T A G A T C G G T A C A C G T
A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

ZIC1/MA0696.1/Jaspar

Match Rank:10
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TTTACCACYAGRGGGC-
---CACAGCGGGGGGTC
 G A C T G A C T A G C T T G C A A T G C G T A C G T C A A T G C G A C T C T G A A C T G C T A G C T A G C T A G A T C G G T A C A C G T
A C G T A C G T A C G T T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C