Information for 13-CCTGCTGAAAACTTAT (Motif 18)

A G T C A G T C C G A T A C T G A G T C A C G T A C T G C G T A C T G A C G T A C G T A G T A C A G C T A G C T C G T A A C G T
Reverse Opposite:
G T C A A C G T C T G A C T G A A C T G C G A T A C G T A G C T C G A T A G T C C G T A A C T G G T A C C G T A A C T G A C T G
p-value:1e-11
log p-value:-2.554e+01
Information Content per bp:1.898
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets36.2 +/- 18.4bp
Average Position of motif in Background83.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CCTGCTGAAAACTTAT
CCTGCTGAGH------
 A G T C A G T C C G A T A C T G A G T C A C G T A C T G C G T A C T G A C G T A C G T A G T A C A G C T A G C T C G T A A C G T
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CCTGCTGAAAACTTAT
CCCCCTGCTGTG-------
 A C G T A C G T A C G T A G T C A G T C C G A T A C T G A G T C A C G T A C T G C G T A C T G A C G T A C G T A G T A C A G C T A G C T C G T A A C G T
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:3
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CCTGCTGAAAACTTAT
GGCCYCCTGCTGDGH------
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C T G A G T C A C G T A C T G C G T A C T G A C G T A C G T A G T A C A G C T A G C T C G T A A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T A C G T A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:4
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CCTGCTGAAAACTTAT
TNTCCTGCTGTGNNG----
 A C G T A C G T A C G T A G T C A G T C C G A T A C T G A G T C A C G T A C T G C G T A C T G A C G T A C G T A G T A C A G C T A G C T C G T A A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CCTGCTGAAAACTTAT
NNTCCTGCTGTGNNN----
 A C G T A C G T A C G T A G T C A G T C C G A T A C T G A G T C A C G T A C T G C G T A C T G A C G T A C G T A G T A C A G C T A G C T C G T A A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C A C G T A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CCTGCTGAAAACTTAT
TCNCCTGCTGNGNNN----
 A C G T A C G T A C G T A G T C A G T C C G A T A C T G A G T C A C G T A C T G C G T A C T G A C G T A C G T A G T A C A G C T A G C T C G T A A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T A C G T A C G T A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CCTGCTGAAAACTTAT
GGTGYTGACAGS----
 A G T C A G T C C G A T A C T G A G T C A C G T A C T G C G T A C T G A C G T A C G T A G T A C A G C T A G C T C G T A A C G T
T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G A C G T A C G T A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:8
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CCTGCTGAAAACTTAT
AATTTGCTGAC-------
 A C G T A C G T A G T C A G T C C G A T A C T G A G T C A C G T A C T G C G T A C T G A C G T A C G T A G T A C A G C T A G C T C G T A A C G T
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CCTGCTGAAAACTTAT
ANCAGCTG---------
 A C G T A G T C A G T C C G A T A C T G A G T C A C G T A C T G C G T A C T G A C G T A C G T A G T A C A G C T A G C T C G T A A C G T
C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:10
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CCTGCTGAAAACTTAT
-ATGATGCAAT-----
 A G T C A G T C C G A T A C T G A G T C A C G T A C T G C G T A C T G A C G T A C G T A G T A C A G C T A G C T C G T A A C G T
A C G T T G C A A G C T A C T G C G T A A G C T C A T G G A T C T G C A C G T A A G C T A C G T A C G T A C G T A C G T A C G T