Information for 9-AGATWGCAATCTGGTT (Motif 11)

G C T A T A C G C G T A A C G T C G A T A C T G A G T C G T C A C T G A C A G T G T A C C G A T C T A G A T C G A G C T A C G T
Reverse Opposite:
G T C A T C G A A T G C A G T C C G T A C A T G G T C A A G C T C A G T C T A G G T A C G C T A C G T A A C G T A G T C C G A T
p-value:1e-12
log p-value:-2.993e+01
Information Content per bp:1.690
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.95%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.0 +/- 25.7bp
Average Position of motif in Background81.2 +/- 4.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:1
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--AGATWGCAATCTGGTT
NNAGATNVNWATCTN---
 A C G T A C G T G C T A T A C G C G T A A C G T C G A T A C T G A G T C G T C A C T G A C A G T G T A C C G A T C T A G A T C G A G C T A C G T
C T A G T G A C C G T A A C T G C G T A A C G T G C T A T C G A A G C T C G A T C G T A A C G T A G T C C G A T T A C G A C G T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:2
Score:0.64
Offset:5
Orientation:forward strand
Alignment:AGATWGCAATCTGGTT
-----GCCATCTGTT-
 G C T A T A C G C G T A A C G T C G A T A C T G A G T C G T C A C T G A C A G T G T A C C G A T C T A G A T C G A G C T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:3
Score:0.62
Offset:5
Orientation:forward strand
Alignment:AGATWGCAATCTGGTT
-----RCCATMTGTT-
 G C T A T A C G C G T A A C G T C G A T A C T G A G T C G T C A C T G A C A G T G T A C C G A T C T A G A T C G A G C T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:4
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:AGATWGCAATCTGGTT-
-----GCCAGCTGBTNB
 G C T A T A C G C G T A A C G T C G A T A C T G A G T C G T C A C T G A C A G T G T A C C G A T C T A G A T C G A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:5
Score:0.58
Offset:5
Orientation:forward strand
Alignment:AGATWGCAATCTGGTT
-----ACCATCTGTT-
 G C T A T A C G C G T A A C G T C G A T A C T G A G T C G T C A C T G A C A G T G T A C C G A T C T A G A T C G A G C T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AGATWGCAATCTGGTT----
ANAGTGCCACCTGGTGGCCA
 G C T A T A C G C G T A A C G T C G A T A C T G A G T C G T C A C T G A C A G T G T A C C G A T C T A G A T C G A G C T A C G T A C G T A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:7
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:AGATWGCAATCTGGTT
------CCAGCTGTTN
 G C T A T A C G C G T A A C G T C G A T A C T G A G T C G T C A C T G A C A G T G T A C C G A T C T A G A T C G A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A

Neurog1/MA0623.1/Jaspar

Match Rank:8
Score:0.53
Offset:5
Orientation:forward strand
Alignment:AGATWGCAATCTGGTT
-----ACCATATGGT-
 G C T A T A C G C G T A A C G T C G A T A C T G A G T C G T C A C T G A C A G T G T A C C G A T C T A G A T C G A G C T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A T A G C T G A C C T G A A C G T T G C A G A C T C A T G A C T G A G C T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:AGATWGCAATCTGGTT
-------CAGCTGNT-
 G C T A T A C G C G T A A C G T C G A T A C T G A G T C G T C A C T G A C A G T G T A C C G A T C T A G A T C G A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T

TAL1::TCF3/MA0091.1/Jaspar

Match Rank:10
Score:0.52
Offset:3
Orientation:forward strand
Alignment:AGATWGCAATCTGGTT
---CGACCATCTGTT-
 G C T A T A C G C G T A A C G T C G A T A C T G A G T C G T C A C T G A C A G T G T A C C G A T C T A G A T C G A G C T A C G T
A C G T A C G T A C G T G T A C T A C G C T G A G T A C A T G C C G T A A C G T G T A C A C G T A C T G A C G T G A C T A C G T