Information for 5-GCAATGTGGTCAG (Motif 10)

A T C G A T G C G C T A C T G A A C G T A T C G A C G T A C T G A T C G G A C T G A T C C G T A A C T G
Reverse Opposite:
T A G C A C G T C T A G C T G A A T G C A G T C C G T A A T G C C G T A A G C T C A G T A T C G A T G C
p-value:1e-13
log p-value:-2.999e+01
Information Content per bp:1.790
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.49%
Number of Background Sequences with motif21.4
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets50.5 +/- 21.2bp
Average Position of motif in Background60.2 +/- 34.1bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:GCAATGTGGTCAG
-NNHTGTGGTTWN
 A T C G A T G C G C T A C T G A A C G T A T C G A C G T A C T G A T C G G A C T G A T C C G T A A C T G
A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:GCAATGTGGTCAG
---CTGTGGTTTN
 A T C G A T G C G C T A C T G A A C G T A T C G A C G T A C T G A T C G G A C T G A T C C G T A A C T G
A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

Myc/MA0147.2/Jaspar

Match Rank:3
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GCAATGTGGTCAG
-CCATGTGCTT--
 A T C G A T G C G C T A C T G A A C G T A T C G A C G T A C T G A T C G G A C T G A T C C G T A A C T G
A C G T T G A C A G T C C G T A A G C T A C T G A C G T A C T G A T G C G A C T A G C T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GCAATGTGGTCAG
--GCTGTGGTTT-
 A T C G A T G C G C T A C T G A A C G T A T C G A C G T A C T G A T C G G A C T G A T C C G T A A C T G
A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T

GLI2/MA0734.1/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GCAATGTGGTCAG
-CAGTGTGGTCGC
 A T C G A T G C G C T A C T G A A C G T A T C G A C G T A C T G A T C G G A C T G A T C C G T A A C T G
A C G T G A T C G C T A C A T G A C G T A T C G C A G T T A C G C T A G A C G T G T A C A C T G G A T C

RUNX1/MA0002.2/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GCAATGTGGTCAG
-GTCTGTGGTTT-
 A T C G A T G C G C T A C T G A A C G T A T C G A C G T A C T G A T C G G A C T G A T C C G T A A C T G
A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:7
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GCAATGTGGTCAG
--NNTGTGGTTT-
 A T C G A T G C G C T A C T G A A C G T A T C G A C G T A C T G A T C G G A C T G A T C C G T A A C T G
A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:8
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GCAATGTGGTCAG
----TRAGGTCA-
 A T C G A T G C G C T A C T G A A C G T A T C G A C G T A C T G A T C G G A C T G A T C C G T A A C T G
A C G T A C G T A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T

Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer

Match Rank:9
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GCAATGTGGTCAG
-NRRTGACGTCAT
 A T C G A T G C G C T A C T G A A C G T A T C G A C G T A C T G A T C G G A C T G A T C C G T A A C T G
A C G T A T G C T C A G T C G A G C A T A C T G C G T A A G T C T C A G G A C T T G A C C G T A A G C T

PB0104.1_Zscan4_1/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCAATGTGGTCAG----
TACATGTGCACATAAAA
 A T C G A T G C G C T A C T G A A C G T A T C G A C G T A C T G A T C G G A C T G A T C C G T A A C T G A C G T A C G T A C G T A C G T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A