Information for 4-CGGCAGGCACGGG (Motif 6)

A G T C A C T G A C T G A G T C C G T A A C T G A T C G A T G C C G T A A G T C A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C A C T G A C G T A T C G A T G C A G T C A C G T C T A G A G T C A G T C A C T G
p-value:1e-10
log p-value:-2.471e+01
Information Content per bp:1.940
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.6 +/- 17.5bp
Average Position of motif in Background14.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hes1/MA1099.1/Jaspar

Match Rank:1
Score:0.59
Offset:5
Orientation:forward strand
Alignment:CGGCAGGCACGGG--
-----GGCACGCGTC
 A G T C A C T G A C T G A G T C C G T A A C T G A T C G A T G C C G T A A G T C A C T G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G T A C G G A T C C T G A A G T C T C A G G A T C A C T G G A C T G T A C

HEY1/MA0823.1/Jaspar

Match Rank:2
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:CGGCAGGCACGGG--
-----GGCACGTGTC
 A G T C A C T G A C T G A G T C C G T A A C T G A T C G A T G C C G T A A G T C A C T G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G T C A G G A T C T C G A A T G C A C T G A G C T T C A G A G C T A T G C

HEY2/MA0649.1/Jaspar

Match Rank:3
Score:0.59
Offset:5
Orientation:forward strand
Alignment:CGGCAGGCACGGG--
-----GACACGTGCC
 A G T C A C T G A C T G A G T C C G T A A C T G A T C G A T G C C G T A A G T C A C T G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T C G A T G A C C T G A G T A C T A C G G A C T A T C G A G T C T A G C

HES5/MA0821.1/Jaspar

Match Rank:4
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CGGCAGGCACGGG---
----TGGCACGTGCCG
 A G T C A C T G A C T G A G T C C G T A A C T G A T C G A T G C C G T A A G T C A C T G A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T T C A G T C A G A G T C C T G A A G T C C A T G A G C T A C T G A G T C A G T C C T A G

BHLHE40/MA0464.2/Jaspar

Match Rank:5
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:CGGCAGGCACGGG--
-----GTCACGTGAN
 A G T C A C T G A C T G A G T C C G T A A C T G A T C G A T G C C G T A A G T C A C T G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G C A G T T G A C C T G A A G T C C T A G A C G T C A T G G T C A A C G T

bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CGGCAGGCACGGG-
----NGKCACGTGM
 A G T C A C T G A C T G A G T C C G T A A C T G A T C G A T G C C G T A A G T C A C T G A C T G A C T G A C G T
A C G T A C G T A C G T A C G T T C G A T C A G C A T G A G T C C G T A A G T C C T A G A C G T A C T G G T A C

MNT/MA0825.1/Jaspar

Match Rank:7
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:CGGCAGGCACGGG--
-----NGCACGTGNT
 A G T C A C T G A C T G A G T C C G T A A C T G A T C G A T G C C G T A A G T C A C T G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G A C T G G T A C G T C A A G T C T C A G C G A T C A T G A T C G G A C T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CGGCAGGCACGGG-
---AAGGCAAGTGT
 A G T C A C T G A C T G A G T C C G T A A C T G A T C G A T G C C G T A A G T C A C T G A C T G A C T G A C G T
A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:9
Score:0.55
Offset:5
Orientation:forward strand
Alignment:CGGCAGGCACGGG
-----GNCACGTG
 A G T C A C T G A C T G A G T C C G T A A C T G A T C G A T G C C G T A A G T C A C T G A C T G A C T G
A C G T A C G T A C G T A C G T A C G T C T A G C A G T T G A C C G T A G A T C T C A G G A C T C A T G

TFE3/MA0831.1/Jaspar

Match Rank:10
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:CGGCAGGCACGGG--
-----GTCACGTGNT
 A G T C A C T G A C T G A G T C C G T A A C T G A T C G A T G C C G T A A G T C A C T G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G A C G T T G A C C G T A A G T C T C A G C G A T A T C G T C G A A G C T