Information for 9-KAGAYAGRAGGCY (Motif 9)

A C G T C G T A A C T G C G T A A G C T C G T A A C T G C T A G C G T A A C T G A C T G A T G C A G C T
Reverse Opposite:
C T G A A T C G A G T C G T A C A C G T A G T C A G T C A C G T C T G A A C G T A G T C A C G T G T C A
p-value:1e-9
log p-value:-2.233e+01
Information Content per bp:1.873
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets36.0 +/- 22.9bp
Average Position of motif in Background41.0 +/- 25.1bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GATA3/MA0037.2/Jaspar

Match Rank:1
Score:0.59
Offset:1
Orientation:forward strand
Alignment:KAGAYAGRAGGCY
-AGATAAGA----
 A C G T C G T A A C T G C G T A A G C T C G T A A C T G C T A G C G T A A C T G A C T G A T G C A G C T
A C G T C G T A A C T G C G T A A C G T C G T A C G T A C T A G T C G A A C G T A C G T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:2
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:KAGAYAGRAGGCY
--AACAGATGGC-
 A C G T C G T A A C T G C G T A A G C T C G T A A C T G C T A G C G T A A C T G A C T G A T G C A G C T
A C G T A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:3
Score:0.56
Offset:1
Orientation:forward strand
Alignment:KAGAYAGRAGGCY
-AGATAASR----
 A C G T C G T A A C T G C G T A A G C T C G T A A C T G C T A G C G T A A C T G A C T G A T G C A G C T
A C G T G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A A C G T A C G T A C G T A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.55
Offset:2
Orientation:forward strand
Alignment:KAGAYAGRAGGCY
--AACAGGAAGT-
 A C G T C G T A A C T G C G T A A G C T C G T A A C T G C T A G C G T A A C T G A C T G A T G C A G C T
A C G T A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.55
Offset:-8
Orientation:forward strand
Alignment:--------KAGAYAGRAGGCY
SMCAGTCWGAKGGAGGAGGC-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A G C T C G T A A C T G C T A G C G T A A C T G A C T G A T G C A G C T
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C A C G T

Gata1/MA0035.3/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-KAGAYAGRAGGCY
ANAGATAAGAA---
 A C G T A C G T C G T A A C T G C G T A A G C T C G T A A C T G C T A G C G T A A C T G A C T G A T G C A G C T
C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A A C G T A C G T A C G T

Gata4/MA0482.1/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--KAGAYAGRAGGCY
NNGAGATAAGA----
 A C G T A C G T A C G T C G T A A C T G C G T A A G C T C G T A A C T G C T A G C G T A A C T G A C T G A T G C A G C T
T C A G C T A G T A C G C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A A C G T A C G T A C G T A C G T

PB0021.1_Gata3_1/Jaspar

Match Rank:8
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------KAGAYAGRAGGCY---
TTTTTAGAGATAAGAAATAAAG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A G C T C G T A A C T G C T A G C G T A A C T G A C T G A T G C A G C T A C G T A C G T A C G T
A C G T C A G T G C A T C A G T C G A T C T G A C A T G G C T A A C T G C G T A C G A T G C T A C G T A T A C G T G C A C T G A G C T A A C G T C G T A G T C A T C G A C A T G

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.53
Offset:8
Orientation:forward strand
Alignment:KAGAYAGRAGGCY---
--------AGGCCTNG
 A C G T C G T A A C T G C G T A A G C T C G T A A C T G C T A G C G T A A C T G A C T G A T G C A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

GATA5/MA0766.1/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:forward strand
Alignment:KAGAYAGRAGGCY
-AGATAAGA----
 A C G T C G T A A C T G C G T A A G C T C G T A A C T G C T A G C G T A A C T G A C T G A T G C A G C T
A C G T G C T A A C T G C T G A A C G T G C T A C T G A T A C G T C G A A C G T A C G T A C G T A C G T