Information for 2-CAYARMCASYSYCCAR (Motif 4)

A G T C C G T A A G C T C G T A T C G A G T A C A G T C C G T A A T G C A G T C A T G C A G T C A G T C G T A C C G T A C T G A
Reverse Opposite:
G A C T A C G T A C T G A C T G C T A G T A C G C T A G A T C G A C G T A C T G A C T G A G C T C G A T C T G A A C G T A C T G
p-value:1e-11
log p-value:-2.672e+01
Information Content per bp:1.799
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.00%
Number of Background Sequences with motif5.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets37.1 +/- 19.3bp
Average Position of motif in Background34.2 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RREB1/MA0073.1/Jaspar

Match Rank:1
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CAYARMCASYSYCCAR--
CCCCAAACCACCCCCCCCCA
 A C G T A C G T A G T C C G T A A G C T C G T A T C G A G T A C A G T C C G T A A T G C A G T C A T G C A G T C A G T C G T A C C G T A C T G A A C G T A C G T
G T A C G T A C G T A C A G T C G T C A G T C A G T C A G T A C A G T C C G T A G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C T A G C T G A C

MF0005.1_Forkhead_class/Jaspar

Match Rank:2
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-CAYARMCASYSYCCAR
AAATAAACA--------
 A C G T A G T C C G T A A G C T C G T A T C G A G T A C A G T C C G T A A T G C A G T C A T G C A G T C A G T C G T A C C G T A C T G A
T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FOXP3/MA0850.1/Jaspar

Match Rank:3
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CAYARMCASYSYCCAR
-GTAAACA--------
 A G T C C G T A A G C T C G T A T C G A G T A C A G T C C G T A A T G C A G T C A T G C A G T C A G T C G T A C C G T A C T G A
A C G T C T A G G A C T C G T A C T G A T C G A A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FOXL1/MA0033.2/Jaspar

Match Rank:4
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CAYARMCASYSYCCAR
-GTAAACA--------
 A G T C C G T A A G C T C G T A T C G A G T A C A G T C C G T A A T G C A G T C A T G C A G T C A G T C G T A C C G T A C T G A
A C G T C T A G G A C T T G C A G T C A T G C A A G T C G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:5
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---CAYARMCASYSYCCAR
WWATRTAAACAN-------
 A C G T A C G T A C G T A G T C C G T A A G C T C G T A T C G A G T A C A G T C C G T A A T G C A G T C A T G C A G T C A G T C G T A C C G T A C T G A
G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--CAYARMCASYSYCCAR
GCCACACCCA--------
 A C G T A C G T A G T C C G T A A G C T C G T A T C G A G T A C A G T C C G T A A T G C A G T C A T G C A G T C A G T C G T A C C G T A C T G A
C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Foxq1/MA0040.1/Jaspar

Match Rank:7
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:CAYARMCASYSYCCAR
AATAAACAATN-----
 A G T C C G T A A G C T C G T A T C G A G T A C A G T C C G T A A T G C A G T C A T G C A G T C A G T C G T A C C G T A C T G A
G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A A C G T A C G T A C G T A C G T A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:8
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---CAYARMCASYSYCCAR
GGCCACACCCAN-------
 A C G T A C G T A C G T A G T C C G T A A G C T C G T A T C G A G T A C A G T C C G T A A T G C A G T C A T G C A G T C A G T C G T A C C G T A C T G A
C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

KLF16/MA0741.1/Jaspar

Match Rank:9
Score:0.49
Offset:4
Orientation:forward strand
Alignment:CAYARMCASYSYCCAR
----GCCACGCCCCC-
 A G T C C G T A A G C T C G T A T C G A G T A C A G T C C G T A A T G C A G T C A T G C A G T C A G T C G T A C C G T A C T G A
A C G T A C G T A C G T A C G T T C A G G T A C G T A C T G C A G T A C C T A G G T A C T A G C G A T C G T A C G A T C A C G T

PB0025.1_Glis2_1/Jaspar

Match Rank:10
Score:0.49
Offset:2
Orientation:forward strand
Alignment:CAYARMCASYSYCCAR--
--TATCGACCCCCCACAG
 A G T C C G T A A G C T C G T A T C G A G T A C A G T C C G T A A T G C A G T C A T G C A G T C A G T C G T A C C G T A C T G A A C G T A C G T
A C G T A C G T G A C T G C T A G C A T T A G C A C T G T G C A A G T C A G T C G A T C G A T C G A T C G A T C T G C A A G T C C T G A C A T G