Information for 12-GCATAACAGG (Motif 28)

A C T G A G T C G T C A A C G T C G T A C G T A A G T C C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A C T G A C G T A C G T C G T A A C G T C T A G G T A C
p-value:1e-5
log p-value:-1.350e+01
Information Content per bp:1.918
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif13.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets72.8 +/- 21.1bp
Average Position of motif in Background56.7 +/- 21.1bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0120.1_Foxj1_2/Jaspar

Match Rank:1
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GCATAACAGG--
ATGTCACAACAACAC
 A C G T A C G T A C G T A C T G A G T C G T C A A C G T C G T A C G T A A G T C C G T A A C T G A C T G A C G T A C G T
C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C

PB0121.1_Foxj3_2/Jaspar

Match Rank:2
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----GCATAACAGG---
AACACCAAAACAAAGGA
 A C G T A C G T A C G T A C G T A C T G A G T C G T C A A C G T C G T A C G T A A G T C C G T A A C T G A C T G A C G T A C G T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

PB0141.1_Isgf3g_2/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GCATAACAGG----
GCAAAACATTACTA
 A C T G A G T C G T C A A C G T C G T A C G T A A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T
A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:GCATAACAGG
----CACAGN
 A C T G A G T C G T C A A C G T C G T A C G T A A G T C C G T A A C T G A C T G
A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.62
Offset:4
Orientation:forward strand
Alignment:GCATAACAGG----
----AACAGGAAGT
 A C T G A G T C G T C A A C G T C G T A C G T A A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T

MEIS2/MA0774.1/Jaspar

Match Rank:6
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GCATAACAGG
--TTGACAGC
 A C T G A G T C G T C A A C G T C G T A C G T A A G T C C G T A A C T G A C T G
A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C

Rhox11/MA0629.1/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GCATAACAGG-----
TCNNTTTACAGCGNNNT
 A C G T A C G T A C T G A G T C G T C A A C G T C G T A C G T A A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0157.1_Rhox11_1/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GCATAACAGG-----
TCNNTTTACAGCGNNNT
 A C G T A C G T A C T G A G T C G T C A A C G T C G T A C G T A A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0158.1_Rhox11_2/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GCATAACAGG-----
TCNCTTTACAGCGNNNT
 A C G T A C G T A C T G A G T C G T C A A C G T C G T A C G T A A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:10
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GCATAACAGG--
--NHAACBGYYV
 A C T G A G T C G T C A A C G T C G T A C G T A A G T C C G T A A C T G A C T G A C G T A C G T
A C G T A C G T A G T C G C A T C G T A C G T A G T A C A C G T A C T G G A T C G A T C T C G A