Information for 11-ACAGTGACTA (Motif 27)

C G T A A G T C C G T A C T A G A C G T A C T G C G T A A G T C A C G T C G T A
Reverse Opposite:
A C G T C G T A A C T G A C G T A G T C C G T A A G T C A C G T A C T G A C G T
p-value:1e-6
log p-value:-1.392e+01
Information Content per bp:1.963
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif11.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets50.8 +/- 29.7bp
Average Position of motif in Background52.7 +/- 38.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax2/MA0067.1/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:ACAGTGACTA
-NCGTGACN-
 C G T A A G T C C G T A C T A G A C G T A C T G C G T A A G T C A C G T C G T A
A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:ACAGTGACTA-----
ACCGTGACTAATTNN
 C G T A A G T C C G T A C T A G A C G T A C T G C G T A A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T
C G T A T A G C A G T C C T A G C A G T C T A G C T G A G T A C G C A T T C G A C G T A G C A T A G C T C T A G T C G A

PB0195.1_Zbtb3_2/Jaspar

Match Rank:3
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------ACAGTGACTA
NNNNTGCCAGTGATTG
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A C T A G A C G T A C T G C G T A A G T C A C G T C G T A
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G

Sox17/MA0078.1/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-ACAGTGACTA
GACAATGNN--
 A C G T C G T A A G T C C G T A C T A G A C G T A C T G C G T A A G T C A C G T C G T A
T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:ACAGTGACTA
ACAAAG----
 C G T A A G T C C G T A C T A G A C G T A C T G C G T A A G T C A C G T C G T A
G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:6
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---ACAGTGACTA
VRRACAAWGG---
 A C G T A C G T A C G T C G T A A G T C C G T A C T A G A C G T A C T G C G T A A G T C A C G T C G T A
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T

FOSL1/MA0477.1/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:forward strand
Alignment:ACAGTGACTA---
--GGTGACTCATG
 C G T A A G T C C G T A C T A G A C G T A C T G C G T A A G T C A C G T C G T A A C G T A C G T A C G T
A C G T A C G T C T A G T C A G A C G T A C T G C G T A T A G C A C G T G T A C C G T A A C G T T A C G

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:ACAGTGACTA
--CATGAC--
 C G T A A G T C C G T A C T A G A C G T A C T G C G T A A G T C A C G T C G T A
A C G T A C G T T A G C T C G A A C G T C A T G C G T A A G T C A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--ACAGTGACTA
RAACAATGGN--
 A C G T A C G T C G T A A G T C C G T A C T A G A C G T A C T G C G T A A G T C A C G T C G T A
C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:10
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---ACAGTGACTA
VRAACAATGG---
 A C G T A C G T A C G T C G T A A G T C C G T A C T A G A C G T A C T G C G T A A G T C A C G T C G T A
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T A C G T