Information for 12-ATACATAGCTCAGTCC (Motif 25)

C G T A A G C T C G T A A G T C C T G A A G C T C G T A A C T G A G T C C G A T A G T C C G T A A C T G A C G T A T G C A G T C
Reverse Opposite:
A C T G A T C G C G T A A G T C A C G T T C A G C G T A A C T G A G T C A C G T C T G A A G C T A C T G A C G T C T G A A C G T
p-value:1e-6
log p-value:-1.439e+01
Information Content per bp:1.909
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.43%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets66.3 +/- 31.4bp
Average Position of motif in Background52.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.52
Offset:3
Orientation:forward strand
Alignment:ATACATAGCTCAGTCC
---CAAAGGTCAG---
 C G T A A G C T C G T A A G T C C T G A A G C T C G T A A C T G A G T C C G A T A G T C C G T A A C T G A C G T A T G C A G T C
A C G T A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T A C G T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:2
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-ATACATAGCTCAGTCC
TATAAGTAGGTCAA---
 A C G T C G T A A G C T C G T A A G T C C T G A A G C T C G T A A C T G A G T C C G A T A G T C C G T A A C T G A C G T A T G C A G T C
C G A T C G T A C G A T G T C A C G T A A T C G A C G T C T G A A C T G A C T G A C G T A G T C C G T A T C G A A C G T A C G T A C G T

MEF2B/MA0660.1/Jaspar

Match Rank:3
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---ATACATAGCTCAGTCC
GCTATAAATAGC-------
 A C G T A C G T A C G T C G T A A G C T C G T A A G T C C T G A A G C T C G T A A C T G A G T C C G A T A G T C C G T A A C T G A C G T A T G C A G T C
C T A G G T A C A G C T C G T A G C A T C G T A G C T A C G T A A C G T G C T A T C A G G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:4
Score:0.50
Offset:0
Orientation:forward strand
Alignment:ATACATAGCTCAGTCC
ATGCATAATTCA----
 C G T A A G C T C G T A A G T C C T G A A G C T C G T A A C T G A G T C C G A T A G T C C G T A A C T G A C G T A T G C A G T C
G C T A C G A T C T A G G T A C G C T A C G A T C G T A G C T A C G A T C A G T G A T C G C T A A C G T A C G T A C G T A C G T

MEF2D/MA0773.1/Jaspar

Match Rank:5
Score:0.49
Offset:-3
Orientation:forward strand
Alignment:---ATACATAGCTCAGTCC
ACTATAAATAGA-------
 A C G T A C G T A C G T C G T A A G C T C G T A A G T C C T G A A G C T C G T A A C T G A G T C C G A T A G T C C G T A A C T G A C G T A T G C A G T C
C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:6
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---ATACATAGCTCAGTCC
GCTAAAAATAGC-------
 A C G T A C G T A C G T C G T A A G C T C G T A A G T C C T G A A G C T C G T A A C T G A G T C C G A T A G T C C G T A A C T G A C G T A T G C A G T C
A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:7
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---ATACATAGCTCAGTCC
KCCAAAAATAGC-------
 A C G T A C G T A C G T C G T A A G C T C G T A A G T C C T G A A G C T C G T A A C T G A G T C C G A T A G T C C G T A A C T G A C G T A T G C A G T C
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

DMRT3/MA0610.1/Jaspar

Match Rank:8
Score:0.49
Offset:-4
Orientation:reverse strand
Alignment:----ATACATAGCTCAGTCC
NTTGATACATT---------
 A C G T A C G T A C G T A C G T C G T A A G C T C G T A A G T C C T G A A G C T C G T A A C T G A G T C C G A T A G T C C G T A A C T G A C G T A T G C A G T C
C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MAF::NFE2/MA0501.1/Jaspar

Match Rank:9
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:ATACATAGCTCAGTCC-
--AAANTGCTGAGTCAT
 C G T A A G C T C G T A A G T C C T G A A G C T C G T A A C T G A G T C C G A T A G T C C G T A A C T G A C G T A T G C A G T C A C G T
A C G T A C G T C T G A C G T A G C T A G A C T G A C T T A C G G T A C G C A T C A T G G C T A T A C G A C G T G T A C C G T A A G C T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.48
Offset:-3
Orientation:forward strand
Alignment:---ATACATAGCTCAGTCC
DCYAAAAATAGM-------
 A C G T A C G T A C G T C G T A A G C T C G T A A G T C C T G A A G C T C G T A A C T G A G T C C G A T A G T C C G T A A C T G A C G T A T G C A G T C
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T