Information for 15-ACAAAGGGTGCAA (Motif 20)

C T G A A G T C C G T A G T C A C G T A A C T G A C T G A C T G C G A T A C T G A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G A G T C C G T A A G T C A G T C G T A C A C G T A C G T A C G T A C T G A G C T
p-value:1e-7
log p-value:-1.722e+01
Information Content per bp:1.934
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets34.2 +/- 26.6bp
Average Position of motif in Background61.1 +/- 13.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox2/MA0143.3/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-ACAAAGGGTGCAA
AACAAAGG------
 A C G T C T G A A G T C C G T A G T C A C G T A A C T G A C T G A C T G C G A T A C T G A G T C C G T A C G T A
T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---ACAAAGGGTGCAA
AAAACAAAGG------
 A C G T A C G T A C G T C T G A A G T C C G T A G T C A C G T A A C T G A C T G A C T G C G A T A C T G A G T C C G T A C G T A
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-ACAAAGGGTGCAA
RACAAWGG------
 A C G T C T G A A G T C C G T A G T C A C G T A A C T G A C T G A C T G C G A T A C T G A G T C C G T A C G T A
T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:ACAAAGGGTGCAA
ACAAAGGNBCCT-
 C T G A A G T C C G T A G T C A C G T A A C T G A C T G A C T G C G A T A C T G A G T C C G T A C G T A
G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:5
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---ACAAAGGGTGCAA
VRRACAAWGG------
 A C G T A C G T A C G T C T G A A G T C C G T A G T C A C G T A A C T G A C T G A C T G C G A T A C T G A G T C C G T A C G T A
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:6
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---ACAAAGGGTGCAA
GGAACAAAGR------
 A C G T A C G T A C G T C T G A A G T C C G T A G T C A C G T A A C T G A C T G A C T G C G A T A C T G A G T C C G T A C G T A
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T A C G T A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--ACAAAGGGTGCAA
GAACAATGGN-----
 A C G T A C G T C T G A A G T C C G T A G T C A C G T A A C T G A C T G A C T G C G A T A C T G A G T C C G T A C G T A
C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G A C G T A C G T A C G T A C G T A C G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.60
Offset:3
Orientation:forward strand
Alignment:ACAAAGGGTGCAA
---NATGTTGCAA
 C T G A A G T C C G T A G T C A C G T A A C T G A C T G A C T G C G A T A C T G A G T C C G T A C G T A
A C G T A C G T A C G T C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A

SOX10/MA0442.1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:ACAAAGGGTGCAA
ACAAAG-------
 C T G A A G T C C G T A G T C A C G T A A C T G A C T G A C T G C G A T A C T G A G T C C G T A C G T A
G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:10
Score:0.59
Offset:5
Orientation:forward strand
Alignment:ACAAAGGGTGCAA----
-----AGATGCAATCCC
 C T G A A G T C C G T A G T C A C G T A A C T G A C T G A C T G C G A T A C T G A G T C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C