Information for 5-GTGGTTWBSN (Motif 2)

C A T G C A G T C A T G C A T G A G C T G A C T C G T A A C T G T A G C T G A C
Reverse Opposite:
A C T G A T C G T G A C G C A T C T G A T C G A G T A C G T A C G T C A G T A C
p-value:1e-12
log p-value:-2.951e+01
Information Content per bp:1.511
Number of Target Sequences with motif43.0
Percentage of Target Sequences with motif6.13%
Number of Background Sequences with motif738.5
Percentage of Background Sequences with motif1.59%
Average Position of motif in Targets52.5 +/- 28.4bp
Average Position of motif in Background51.1 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.84
Offset:-3
Orientation:reverse strand
Alignment:---GTGGTTWBSN
NNTGTGGTTT---
 A C G T A C G T A C G T C A T G C A G T C A T G C A T G A G C T G A C T C G T A A C T G T A G C T G A C
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.84
Offset:-2
Orientation:reverse strand
Alignment:--GTGGTTWBSN
CTGTGGTTTN--
 A C G T A C G T C A T G C A G T C A T G C A T G A G C T G A C T C G T A A C T G T A G C T G A C
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.81
Offset:-3
Orientation:forward strand
Alignment:---GTGGTTWBSN
GCTGTGGTTT---
 A C G T A C G T A C G T C A T G C A G T C A T G C A T G A G C T G A C T C G T A A C T G T A G C T G A C
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.79
Offset:-4
Orientation:reverse strand
Alignment:----GTGGTTWBSN
NNHTGTGGTTWN--
 A C G T A C G T A C G T A C G T C A T G C A G T C A T G C A T G A G C T G A C T C G T A A C T G T A G C T G A C
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.78
Offset:-4
Orientation:forward strand
Alignment:----GTGGTTWBSN
GTCTGTGGTTT---
 A C G T A C G T A C G T A C G T C A T G C A G T C A T G C A T G A G C T G A C T C G T A A C T G T A G C T G A C
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:6
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--GTGGTTWBSN
TTGCGGTTT---
 A C G T A C G T C A T G C A G T C A T G C A T G A G C T G A C T C G T A A C T G T A G C T G A C
A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:7
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---GTGGTTWBSN
TTTGCGGTTT---
 A C G T A C G T A C G T C A T G C A G T C A T G C A T G A G C T G A C T C G T A A C T G T A G C T G A C
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T A C G T A C G T

FOXP3/MA0850.1/Jaspar

Match Rank:8
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GTGGTTWBSN
-TGTTTAC--
 C A T G C A G T C A T G C A T G A G C T G A C T C G T A A C T G T A G C T G A C
A C G T A G C T T C A G A G C T G A C T C G A T C T G A A G T C A C G T A C G T

ZBTB7C/MA0695.1/Jaspar

Match Rank:9
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----GTGGTTWBSN
NTCGGTGGTCGC--
 A C G T A C G T A C G T A C G T C A T G C A G T C A T G C A T G A G C T G A C T C G T A A C T G T A G C T G A C
A C G T C A G T A G T C C A T G C A T G C A G T T C A G A C T G C A G T G A T C A T C G G A T C A C G T A C G T

FOXG1/MA0613.1/Jaspar

Match Rank:10
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GTGGTTWBSN
TTGTTTAC--
 C A T G C A G T C A T G C A T G A G C T G A C T C G T A A C T G T A G C T G A C
C G A T A C G T A C T G A C G T A C G T A C G T C G T A A G T C A C G T A C G T