Information for 4-CAAGCCTATC (Motif 7)

A G T C G C T A G C T A A C T G A T G C G T A C A G C T T G C A A C G T A G T C
Reverse Opposite:
A C T G G T C A A C G T C T G A A C T G A T C G A G T C C A G T C G A T A C T G
p-value:1e-12
log p-value:-2.910e+01
Information Content per bp:1.846
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.33%
Number of Background Sequences with motif9.9
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets46.1 +/- 16.8bp
Average Position of motif in Background37.7 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0180.1_Sp4_2/Jaspar

Match Rank:1
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----CAAGCCTATC
NNGGCCACGCCTTTN
 A C G T A C G T A C G T A C G T A C G T A G T C G C T A G C T A A C T G A T G C G T A C A G C T T G C A A C G T A G T C
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CAAGCCTATC--
-AAGGATATNTN
 A G T C G C T A G C T A A C T G A T G C G T A C A G C T T G C A A C G T A G T C A C G T A C G T
A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T

Nr2e3/MA0164.1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CAAGCCTATC
CAAGCTT---
 A G T C G C T A G C T A A C T G A T G C G T A C A G C T T G C A A C G T A G T C
G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:4
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CAAGCCTATC--
--AGCCAATCGG
 A G T C G C T A G C T A A C T G A T G C G T A C A G C T T G C A A C G T A G T C A C G T A C G T
A C G T A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CAAGCCTATC
CNAGGCCT---
 A C G T A G T C G C T A G C T A A C T G A T G C G T A C A G C T T G C A A C G T A G T C
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:6
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CAAGCCTATC---
---YCTTATCTBN
 A G T C G C T A G C T A A C T G A T G C G T A C A G C T T G C A A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A G C T A T G C G A C T G C A T C G T A A G C T G T A C C G A T A T C G A G T C

POL004.1_CCAAT-box/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CAAGCCTATC-
ACTAGCCAATCA
 A C G T A G T C G C T A G C T A A C T G A T G C G T A C A G C T T G C A A C G T A G T C A C G T
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

GATA5/MA0766.1/Jaspar

Match Rank:8
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CAAGCCTATC-
---TCTTATCT
 A G T C G C T A G C T A A C T G A T G C G T A C A G C T T G C A A C G T A G T C A C G T
A C G T A C G T A C G T A G C T A T G C G A C T C G A T C G T A A G C T A G T C C G A T

PB0023.1_Gata6_1/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CAAGCCTATC------
NNANTCTTATCTNNNNN
 A C G T A G T C G C T A G C T A A C T G A T G C G T A C A G C T T G C A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A G T C C G T A G C T A G A C T A C G T A T G C C G A T C G A T C T G A C G A T G T A C C G A T G T A C A C G T G C T A C A G T G C T A

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CAAGCCTATC
NNACTTGCCTT--
 A C G T A C G T A C G T A G T C G C T A G C T A A C T G A T G C G T A C A G C T T G C A A C G T A G T C
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T