Information for 11-TCCWWGGTKCTGAASS (Motif 17)

A C G T A G T C A G T C C G T A C G A T A C T G A C T G A C G T A C T G A G T C A C G T A C T G C T G A C G T A T A C G A T G C
Reverse Opposite:
A T C G A T C G A C G T A G C T A G T C C G T A A C T G G T A C C G T A A G T C A G T C C G A T G C A T A C T G A C T G C G T A
p-value:1e-8
log p-value:-1.918e+01
Information Content per bp:1.867
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.2 +/- 23.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REST/MA0138.2/Jaspar

Match Rank:1
Score:0.79
Offset:-7
Orientation:reverse strand
Alignment:-------TCCWWGGTKCTGAASS
GGCGCTGTCCATGGTGCTGAA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A C G A T A C T G A C T G A C G T A C T G A G T C A C G T A C T G C T G A C G T A T A C G A T G C
C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A A C G T A C G T

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:2
Score:0.76
Offset:-7
Orientation:forward strand
Alignment:-------TCCWWGGTKCTGAASS
GGAGCTGTCCATGGTGCTGA---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A C G A T A C T G A C T G A C G T A C T G A G T C A C G T A C T G C T G A C G T A T A C G A T G C
C T A G A T C G G T C A C A T G A G T C G A C T T A C G C A G T A G T C A G T C C T G A C G A T C T A G A T C G G A C T A T C G A G T C G A C T C T A G T C G A A C G T A C G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:3
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---TCCWWGGTKCTGAASS
NNNTCCTTTGTTCTNNN--
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A C G A T A C T G A C T G A C G T A C T G A G T C A C G T A C T G C T G A C G T A T A C G A T G C
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:4
Score:0.52
Offset:3
Orientation:forward strand
Alignment:TCCWWGGTKCTGAASS
---AATTTGCTGAC--
 A C G T A G T C A G T C C G T A C G A T A C T G A C T G A C G T A C T G A G T C A C G T A C T G C T G A C G T A T A C G A T G C
A C G T A C G T A C G T C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.52
Offset:7
Orientation:forward strand
Alignment:TCCWWGGTKCTGAASS-
-------TGCTGACTCA
 A C G T A G T C A G T C C G T A C G A T A C T G A C T G A C G T A C T G A G T C A C G T A C T G C T G A C G T A T A C G A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

MAFK/MA0496.1/Jaspar

Match Rank:6
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:TCCWWGGTKCTGAASS--
---AAANTGCTGACTNAG
 A C G T A G T C A G T C C G T A C G A T A C T G A C T G A C G T A C T G A G T C A C G T A C T G C T G A C G T A T A C G A T G C A C G T A C G T
A C G T A C G T A C G T C G T A C G T A C G T A G C A T C G A T A T C G G T A C A C G T A C T G C T G A A T G C G C A T G A T C C G T A C A T G

Mafb/MA0117.2/Jaspar

Match Rank:7
Score:0.52
Offset:3
Orientation:forward strand
Alignment:TCCWWGGTKCTGAASS
---AAAATGCTGACT-
 A C G T A G T C A G T C C G T A C G A T A C T G A C T G A C G T A C T G A G T C A C G T A C T G C T G A C G T A T A C G A T G C
A C G T A C G T A C G T C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:8
Score:0.51
Offset:5
Orientation:forward strand
Alignment:TCCWWGGTKCTGAASS-
-----GGTGYTGACAGS
 A C G T A G T C A G T C C G T A C G A T A C T G A C T G A C G T A C T G A G T C A C G T A C T G C T G A C G T A T A C G A T G C A C G T
A C G T A C G T A C G T A C G T A C G T T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.51
Offset:5
Orientation:forward strand
Alignment:TCCWWGGTKCTGAASS-
-----GRTGMTRGAGCC
 A C G T A G T C A G T C C G T A C G A T A C T G A C T G A C G T A C T G A G T C A C G T A C T G C T G A C G T A T A C G A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.50
Offset:0
Orientation:forward strand
Alignment:TCCWWGGTKCTGAASS
NCCATTGTTC------
 A C G T A G T C A G T C C G T A C G A T A C T G A C T G A C G T A C T G A G T C A C G T A C T G C T G A C G T A T A C G A T G C
A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T A C G T A C G T A C G T A C G T A C G T