Motif Name	Consensus	P-value	Log P-value	q-value (Benjamini)	# of Target Sequences with Motif(of 754)	% of Target Sequences with Motif	# of Background Sequences with Motif(of 47923)	% of Background Sequences with Motif
CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	AYAGTGCCMYCTRGTGGCCA	1e-24	-5.577e+01	0.0000	34.0	4.51%	186.9	0.39%
BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer	CNNBRGCGCCCCCTGSTGGC	1e-22	-5.226e+01	0.0000	38.0	5.04%	277.6	0.58%
GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer	CRGCTGBNGNSNNSAGATAA	1e-15	-3.625e+01	0.0000	28.0	3.71%	227.7	0.47%
Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer	NBWGATAAGR	1e-13	-2.999e+01	0.0000	87.0	11.54%	2315.2	4.80%
Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer	BBCTTATCTS	1e-12	-2.835e+01	0.0000	64.0	8.49%	1468.7	3.04%
Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer	YCTTATCTBN	1e-12	-2.803e+01	0.0000	78.0	10.34%	2029.4	4.20%
Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer	SAGATAAGRV	1e-11	-2.654e+01	0.0000	59.0	7.82%	1342.9	2.78%
GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATAASR	1e-9	-2.142e+01	0.0000	105.0	13.93%	3575.8	7.41%
E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer	GGCGGGAARN	1e-3	-7.791e+00	0.0167	25.0	3.32%	747.8	1.55%
Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer	TBGCACGCAA	1e-3	-7.187e+00	0.0275	40.0	5.31%	1482.3	3.07%
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer	AGGTCAAGGTCA	1e-2	-6.727e+00	0.0397	10.0	1.33%	195.1	0.40%
GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NNNNNBAGATAWYATCTVHN	1e-2	-6.482e+00	0.0464	11.0	1.46%	237.7	0.49%
AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	VTGACTCATC	1e-2	-6.232e+00	0.0550	40.0	5.31%	1563.7	3.24%
Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer	DGTAAACA	1e-2	-5.943e+00	0.0682	39.0	5.17%	1539.6	3.19%
FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WAAGTAAACA	1e-2	-5.706e+00	0.0807	55.0	7.29%	2395.3	4.96%
Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer	NATGASTCABNN	1e-2	-5.684e+00	0.0807	20.0	2.65%	644.0	1.33%
Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer	NNATGASTCATH	1e-2	-5.427e+00	0.0941	29.0	3.85%	1086.4	2.25%
NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer	GCCATCTGTT	1e-2	-5.313e+00	0.0996	46.0	6.10%	1964.9	4.07%
Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer	WWATRTAAACAN	1e-2	-5.256e+00	0.0999	40.0	5.31%	1657.9	3.44%
Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer	TGATTRATGGCY	1e-2	-5.225e+00	0.0999	13.0	1.72%	362.5	0.75%
JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer	RATGASTCAT	1e-2	-5.113e+00	0.1043	29.0	3.85%	1112.3	2.30%
BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer	DATGASTCAT	1e-2	-4.949e+00	0.1173	33.0	4.38%	1328.7	2.75%
Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer	BTCAAGGTCA	1e-1	-4.494e+00	0.1768	26.0	3.45%	1016.5	2.11%
Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer	KTGACCTTGA	1e-1	-4.438e+00	0.1792	33.0	4.38%	1379.0	2.86%
GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NAGATWNBNATCTNN	1e-1	-4.358e+00	0.1864	6.0	0.80%	121.3	0.25%
ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer	GTCWGCTGTYYCTCT	1e-1	-4.299e+00	0.1902	7.0	0.93%	159.7	0.33%
FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer	WAAGTAAACA	1e-1	-4.235e+00	0.1952	42.0	5.57%	1879.2	3.89%
E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer	GGCGGGAAAH	1e-1	-4.118e+00	0.2116	19.0	2.52%	701.2	1.45%
MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer	HWWGTCAGCAWWTTT	1e-1	-4.077e+00	0.2128	16.0	2.12%	560.0	1.16%
c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	VVCCACGTGG	1e-1	-4.049e+00	0.2128	26.0	3.45%	1057.1	2.19%
STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer	RTTTCTNAGAAA	1e-1	-3.951e+00	0.2258	19.0	2.52%	714.9	1.48%
FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer	NVWTGTTTAC	1e-1	-3.877e+00	0.2356	47.0	6.23%	2200.8	4.56%
Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCAATTA	1e-1	-3.848e+00	0.2356	6.0	0.80%	136.4	0.28%
NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WNTGTTTRYTTTGGCA	1e-1	-3.801e+00	0.2392	5.0	0.66%	101.3	0.21%
ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer	TGGAACAGMA	1e-1	-3.786e+00	0.2392	40.0	5.31%	1829.5	3.79%
MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer	GGCVGTTR	1e-1	-3.714e+00	0.2466	85.0	11.27%	4389.7	9.10%
Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	GATGASTCATCN	1e-1	-3.714e+00	0.2466	13.0	1.72%	443.4	0.92%
Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer	DATGASTCATHN	1e-1	-3.692e+00	0.2466	31.0	4.11%	1356.6	2.81%
FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer	TRTTTACTTW	1e-1	-3.686e+00	0.2466	42.0	5.57%	1952.6	4.05%
FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer	SCHTGTTTACAT	1e-1	-3.565e+00	0.2575	31.0	4.11%	1371.4	2.84%
HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer	GGCCATAAATCA	1e-1	-3.557e+00	0.2575	31.0	4.11%	1372.8	2.84%
Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer	YCATYAATCA	1e-1	-3.544e+00	0.2575	44.0	5.84%	2083.6	4.32%
Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer	BTCAAGGTCA	1e-1	-3.497e+00	0.2575	32.0	4.24%	1433.0	2.97%
Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer	MAATCACTGC	1e-1	-3.472e+00	0.2575	33.0	4.38%	1490.2	3.09%
FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer	WWTRTAAACAVG	1e-1	-3.450e+00	0.2575	34.0	4.51%	1547.9	3.21%
Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer	NTAATBNAATTA	1e-1	-3.406e+00	0.2625	23.0	3.05%	966.1	2.00%
EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer	VACAGGAAAT	1e-1	-3.348e+00	0.2724	29.0	3.85%	1290.1	2.67%
CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer	GCTAATCC	1e-1	-3.322e+00	0.2736	102.0	13.53%	5478.0	11.35%
THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer	GGTCANYTGAGGWCA	1e-1	-3.224e+00	0.2956	19.0	2.52%	777.8	1.61%
Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer	SCTGTCAMTCAN	1e-1	-3.125e+00	0.3199	14.0	1.86%	533.7	1.11%
CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	TGCAGTTCCMVNWRTGGCCA	1e-1	-3.056e+00	0.3361	2.0	0.27%	22.1	0.05%
Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer	NYTAATCCYB	1e-1	-3.054e+00	0.3361	33.0	4.38%	1546.2	3.20%
Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer	CTGTTTAC	1e-1	-3.034e+00	0.3361	86.0	11.41%	4600.9	9.53%
Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer	AWWNTGCTGAGTCAT	1e-1	-3.031e+00	0.3361	5.0	0.66%	125.7	0.26%
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer	VBSYGTCTGG	1e-1	-3.019e+00	0.3361	74.0	9.81%	3897.2	8.07%
Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer	CAAAGGTCAG	1e-1	-2.956e+00	0.3382	92.0	12.20%	4975.6	10.31%
Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer	NNVVCAGCTGBN	1e-1	-2.899e+00	0.3519	76.0	10.08%	4042.2	8.38%
Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer	GGCCATAAATCA	1e-1	-2.871e+00	0.3555	23.0	3.05%	1025.1	2.12%
RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer	SAAACCACAG	1e-1	-2.793e+00	0.3779	33.0	4.38%	1584.9	3.28%
Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer	GGATGACTCATC	1e-1	-2.780e+00	0.3779	22.0	2.92%	982.9	2.04%
n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer	VRCCACGTGG	1e-1	-2.770e+00	0.3779	31.0	4.11%	1476.4	3.06%
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer	CTGTCTGG	1e-1	-2.751e+00	0.3779	71.0	9.42%	3782.8	7.84%
RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	GCTGTGGTTW	1e-1	-2.734e+00	0.3779	33.0	4.38%	1593.7	3.30%
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer	TAATCCCN	1e-1	-2.726e+00	0.3779	189.0	25.07%	10947.6	22.68%
Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer	NRYTTCCGGH	1e-1	-2.698e+00	0.3779	53.0	7.03%	2741.7	5.68%
Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer	HTGCTGAGTCAT	1e-1	-2.697e+00	0.3779	4.0	0.53%	97.4	0.20%
PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer	VAGRACAKNCTGTBC	1e-1	-2.645e+00	0.3856	95.0	12.60%	5237.9	10.85%
Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer	TGCTGAGTCA	1e-1	-2.629e+00	0.3863	11.0	1.46%	423.3	0.88%
PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer	ACCRTGACTAATTNN	1e-1	-2.621e+00	0.3863	10.0	1.33%	374.8	0.78%
Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer	VNRVCAGCTGGY	1e-1	-2.573e+00	0.3970	53.0	7.03%	2767.7	5.73%
E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer	CWGGCGGGAA	1e-1	-2.546e+00	0.4020	8.0	1.06%	282.9	0.59%
NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer	ACCATCTGTT	1e-1	-2.515e+00	0.4089	73.0	9.68%	3958.0	8.20%
ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer	ACAGGAAGTG	1e-1	-2.468e+00	0.4227	49.0	6.50%	2556.2	5.30%
Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer	NNNVCTGWGYAAACASN	1e-1	-2.458e+00	0.4227	43.0	5.70%	2210.8	4.58%
E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer	VDTTTCCCGCCA	1e-1	-2.445e+00	0.4227	5.0	0.66%	150.0	0.31%
NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer	NVCACGTG	1e-1	-2.443e+00	0.4227	74.0	9.81%	4037.0	8.36%
E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer	BTKGGCGGGAAA	1e-1	-2.411e+00	0.4242	18.0	2.39%	810.0	1.68%
Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	NTAATTDGCYAATTANNWWD	1e-1	-2.355e+00	0.4429	2.0	0.27%	33.5	0.07%
NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer	GATGACTCAGCA	1e0	-2.297e+00	0.4632	4.0	0.53%	112.6	0.23%
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer	GYCATCMATCAT	1e0	-2.285e+00	0.4632	6.0	0.80%	203.1	0.42%
Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer	HNRAATCAAT	1e0	-2.237e+00	0.4796	19.0	2.52%	886.9	1.84%
ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer	RCAGGATGTGGT	1e0	-2.222e+00	0.4813	5.0	0.66%	160.8	0.33%
STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer	NATTTCCNGGAAAT	1e0	-2.191e+00	0.4902	13.0	1.72%	566.5	1.17%
NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer	GGAAATTCCC	1e0	-2.136e+00	0.5120	4.0	0.53%	119.1	0.25%
ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer	AGGCCTAG	1e0	-2.127e+00	0.5120	69.0	9.15%	3822.3	7.92%
NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer	CYTGGCABNSTGCCAR	1e0	-2.106e+00	0.5154	14.0	1.86%	629.5	1.30%
MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer	RRCAGCTGYTSY	1e0	-2.092e+00	0.5163	39.0	5.17%	2051.6	4.25%
Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer	ACTYKNATTCGTGNTACTTC	1e0	-2.092e+00	0.5163	4.0	0.53%	121.7	0.25%
Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer	AAACMATTAN	1e0	-2.088e+00	0.5163	19.0	2.52%	906.9	1.88%
GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer	NRGVACABNVTGTYCY	1e0	-2.078e+00	0.5163	7.0	0.93%	265.1	0.55%
Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer	AAGGTGTKAA	1e0	-2.048e+00	0.5163	62.0	8.22%	3425.0	7.10%
Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer	TGTCANYT	1e0	-2.030e+00	0.5199	162.0	21.49%	9552.5	19.79%
Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer	VCAGCTGYTG	1e0	-2.019e+00	0.5199	48.0	6.37%	2597.9	5.38%
GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATGKDGAGATAAG	1e0	-1.968e+00	0.5412	4.0	0.53%	127.6	0.26%
PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer	NGTGTTCAVTSAAGCGKAAA	1e0	-1.953e+00	0.5434	5.0	0.66%	175.7	0.36%
STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer	NYTTCCWGGAAR	1e0	-1.947e+00	0.5434	40.0	5.31%	2141.5	4.44%
JunD(bZIP)/K562-JunD-ChIP-Seq/Homer	ATGACGTCATCN	1e0	-1.920e+00	0.5501	5.0	0.66%	178.0	0.37%
AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer	TGGCAGTTGG	1e0	-1.892e+00	0.5598	67.0	8.89%	3769.9	7.81%
Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer	RCCATMTGTT	1e0	-1.892e+00	0.5598	86.0	11.41%	4923.2	10.20%
Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer	YTGWCADY	1e0	-1.887e+00	0.5598	147.0	19.50%	8682.6	17.99%
FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer	AGGTCANTGACCTB	1e0	-1.880e+00	0.5598	16.0	2.12%	767.3	1.59%
NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer	WGGGGATTTCCC	1e0	-1.813e+00	0.5821	19.0	2.52%	946.7	1.96%
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer	YTGCCAAG	1e0	-1.809e+00	0.5821	79.0	10.48%	4524.3	9.37%
FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer	NYYTGTTTACHN	1e0	-1.797e+00	0.5821	17.0	2.25%	835.5	1.73%
Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer	RTCACSCCAY	1e0	-1.792e+00	0.5821	9.0	1.19%	393.4	0.82%
ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer	SMCAGTCWGAKGGAGGAGGC	1e0	-1.779e+00	0.5821	4.0	0.53%	137.1	0.28%
CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	DRTGTTGCAA	1e0	-1.772e+00	0.5821	31.0	4.11%	1649.9	3.42%
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer	GYMATAAAAH	1e0	-1.752e+00	0.5844	25.0	3.32%	1302.0	2.70%
Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer	CTTCCGGGAA	1e0	-1.749e+00	0.5844	21.0	2.79%	1071.7	2.22%
Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer	ATTAACACCT	1e0	-1.737e+00	0.5844	94.0	12.47%	5469.0	11.33%
EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer	DGTCCCYRGGGA	1e0	-1.735e+00	0.5844	8.0	1.06%	345.9	0.72%
Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer	TGACCTTTNCNT	1e0	-1.724e+00	0.5844	8.0	1.06%	346.9	0.72%
KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer	GGGGGTGTGTCC	1e0	-1.690e+00	0.5941	21.0	2.79%	1081.7	2.24%
Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer	GGTGYTGACAGS	1e0	-1.665e+00	0.6040	11.0	1.46%	516.7	1.07%
Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	ATTGCATCAT	1e0	-1.663e+00	0.6040	10.0	1.33%	462.0	0.96%
Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer	VGCTGWCAVB	1e0	-1.659e+00	0.6040	76.0	10.08%	4392.9	9.10%
Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer	YTAATYNRATTA	1e0	-1.631e+00	0.6088	12.0	1.59%	576.1	1.19%
OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	ATGAATATTCATGAG	1e0	-1.627e+00	0.6088	1.0	0.13%	14.3	0.03%
RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer	NWAACCACADNN	1e0	-1.604e+00	0.6153	34.0	4.51%	1864.4	3.86%
HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer	TACGTGCV	1e0	-1.593e+00	0.6168	12.0	1.59%	581.5	1.20%
Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer	NRYTTCCGGY	1e0	-1.558e+00	0.6336	24.0	3.18%	1281.5	2.66%
HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer	VCAGCTGBNN	1e0	-1.525e+00	0.6496	88.0	11.67%	5180.8	10.73%
AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer	CCAGGAACAG	1e0	-1.516e+00	0.6498	171.0	22.68%	10358.3	21.46%
PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer	AAGAACATWHTGTTC	1e0	-1.510e+00	0.6498	10.0	1.33%	479.1	0.99%
Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer	MTGATGCAAT	1e0	-1.504e+00	0.6498	12.0	1.59%	593.7	1.23%
Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer	ANTTMRCASBNNNGTGYKAAN	1e0	-1.491e+00	0.6507	11.0	1.46%	538.9	1.12%
BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer	NHAACBGYYV	1e0	-1.486e+00	0.6507	65.0	8.62%	3778.7	7.83%
ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer	AGGCCTRG	1e0	-1.477e+00	0.6507	48.0	6.37%	2742.7	5.68%
p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer	NRRRCAWGTCCDGRCATGYY	1e0	-1.471e+00	0.6507	2.0	0.27%	58.9	0.12%
Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)	NNAYTTCCTGHN	1e0	-1.467e+00	0.6507	39.0	5.17%	2199.7	4.56%
Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer	TGACANARRCCAGRC	1e0	-1.458e+00	0.6507	19.0	2.52%	1006.3	2.09%
Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer	GCTATTTTTAGC	1e0	-1.458e+00	0.6507	7.0	0.93%	318.0	0.66%
c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	ATGACGTCATCY	1e0	-1.454e+00	0.6507	12.0	1.59%	600.6	1.24%
ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer	ACVAGGAAGT	1e0	-1.423e+00	0.6549	30.0	3.98%	1668.7	3.46%
MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer	RTCATGTGAC	1e0	-1.399e+00	0.6656	36.0	4.77%	2036.7	4.22%
Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer	ASATCAAAGGVA	1e0	-1.384e+00	0.6706	18.0	2.39%	961.7	1.99%
Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer	CYTGTTTACWYW	1e0	-1.382e+00	0.6706	30.0	3.98%	1678.2	3.48%
Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer	NAHCAGCTGD	1e0	-1.361e+00	0.6764	56.0	7.43%	3269.5	6.77%
SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer	AAAGRGGAAGTG	1e0	-1.349e+00	0.6795	10.0	1.33%	500.0	1.04%
STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer	TTCCKNAGAA	1e0	-1.342e+00	0.6795	22.0	2.92%	1207.6	2.50%
Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer	WATGCAAATGAG	1e0	-1.320e+00	0.6897	14.0	1.86%	737.9	1.53%
RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer	AAACCACARM	1e0	-1.319e+00	0.6897	41.0	5.44%	2363.4	4.90%
Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer	SVYTTCCNGGAARB	1e0	-1.313e+00	0.6897	27.0	3.58%	1514.6	3.14%
SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer	CAAGGHCANV	1e0	-1.309e+00	0.6897	17.0	2.25%	916.0	1.90%
CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	ATTGCGCAAC	1e0	-1.302e+00	0.6897	24.0	3.18%	1336.8	2.77%
Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer	NAACAGCTGG	1e0	-1.301e+00	0.6897	43.0	5.70%	2491.2	5.16%
BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer	GNCACGTG	1e0	-1.284e+00	0.6897	77.0	10.21%	4597.2	9.52%
HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer	NTATYGATCH	1e0	-1.269e+00	0.6912	20.0	2.65%	1103.0	2.29%
Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	MACAGGAAGT	1e0	-1.268e+00	0.6912	13.0	1.72%	687.2	1.42%
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer	RGGTCADNNAGAGGTCAV	1e0	-1.248e+00	0.6969	2.0	0.27%	68.6	0.14%
Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGMATATDC	1e0	-1.240e+00	0.6974	36.0	4.77%	2081.0	4.31%
Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer	RCCACGTGGYYN	1e0	-1.216e+00	0.7098	25.0	3.32%	1417.3	2.94%
Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer	GWAAYHTGAKMC	1e0	-1.214e+00	0.7098	36.0	4.77%	2089.7	4.33%
Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer	ATATGCAAAT	1e0	-1.208e+00	0.7098	11.0	1.46%	579.4	1.20%
ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer	GRTGMTRGAGCC	1e0	-1.205e+00	0.7098	20.0	2.65%	1117.8	2.32%
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer	AAYTAGGTCA	1e0	-1.200e+00	0.7098	5.0	0.66%	233.7	0.48%
Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer	SCTGTCAVTCAV	1e0	-1.197e+00	0.7098	10.0	1.33%	522.6	1.08%
HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer	CARRGKBCAAAGTYCA	1e0	-1.178e+00	0.7098	15.0	1.99%	822.0	1.70%
Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer	SNGCACCTGCHS	1e0	-1.169e+00	0.7112	24.0	3.18%	1368.4	2.84%
Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer	BAACAGCTGT	1e0	-1.169e+00	0.7112	32.0	4.24%	1857.3	3.85%
CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer	NGYCATAAAWCH	1e0	-1.160e+00	0.7112	30.0	3.98%	1737.7	3.60%
bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer	NAGTTTCABTHTGACTNW	1e0	-1.148e+00	0.7132	14.0	1.86%	768.2	1.59%
Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer	HACTTCCGGY	1e0	-1.146e+00	0.7132	22.0	2.92%	1252.8	2.60%
Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer	AGGTGTGAAM	1e0	-1.134e+00	0.7138	44.0	5.84%	2608.4	5.40%
GATA3(Zf),DR8/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATSTNDNNDSAGATAASN	1e0	-1.129e+00	0.7138	3.0	0.40%	128.7	0.27%
p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	ACATGCCCGGGCAT	1e0	-1.129e+00	0.7138	1.0	0.13%	25.9	0.05%
Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer	DCYAAAAATAGM	1e0	-1.127e+00	0.7138	13.0	1.72%	712.5	1.48%
MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer	TGCTGACTCA	1e0	-1.126e+00	0.7138	34.0	4.51%	1993.2	4.13%
GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer	CGTGGGTGGTCC	1e0	-1.125e+00	0.7138	4.0	0.53%	185.0	0.38%
Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer	TGCGTGGGYG	1e0	-1.118e+00	0.7138	20.0	2.65%	1137.3	2.36%
NFY(CCAAT)/Promoter/Homer	RGCCAATSRG	1e0	-1.117e+00	0.7138	27.0	3.58%	1565.7	3.24%
E-box(bHLH)/Promoter/Homer	SSGGTCACGTGA	1e0	-1.116e+00	0.7138	3.0	0.40%	129.3	0.27%
GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer	RGGATTAR	1e0	-1.109e+00	0.7138	41.0	5.44%	2431.8	5.04%
Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer	NRRTGACGTCAT	1e0	-1.105e+00	0.7138	12.0	1.59%	656.3	1.36%
OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	ATGCATWATGCATRW	1e0	-1.099e+00	0.7138	24.0	3.18%	1386.7	2.87%
EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer	GGYAGCAYDTGCTDCCCNNN	1e0	-1.097e+00	0.7138	1.0	0.13%	26.4	0.05%
Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	TATGCWAATBAV	1e0	-1.072e+00	0.7138	10.0	1.33%	542.1	1.12%
SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer	AVCAGCTG	1e0	-1.064e+00	0.7138	227.0	30.11%	14183.7	29.39%
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	GGTTGCCATGGCAA	1e0	-1.062e+00	0.7138	4.0	0.53%	190.5	0.39%
HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer	RTACGTGC	1e0	-1.036e+00	0.7177	47.0	6.23%	2831.7	5.87%
E2F(E2F)/Hela-CellCycle-Expression/Homer	TTSGCGCGAAAA	1e0	-1.035e+00	0.7177	2.0	0.27%	80.8	0.17%
MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer	AACAGCTG	1e0	-1.028e+00	0.7177	47.0	6.23%	2834.5	5.87%
OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	YATGCATATRCATRT	1e0	-1.013e+00	0.7224	4.0	0.53%	195.7	0.41%
Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer	AAGCACTTAA	1e0	-1.011e+00	0.7224	93.0	12.33%	5730.6	11.87%
ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer	ACAGGAAGTG	1e0	-1.009e+00	0.7224	67.0	8.89%	4095.5	8.49%
Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAW	1e0	-9.929e-01	0.7251	16.0	2.12%	922.4	1.91%
FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	AGTAAACAAAAAAGAACAND	1e0	-9.886e-01	0.7251	2.0	0.27%	83.2	0.17%
MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer	WNTGCTGASTCAGCANWTTY	1e0	-9.765e-01	0.7292	14.0	1.86%	803.2	1.66%
GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer	VAGRACAKWCTGTYC	1e0	-9.650e-01	0.7337	9.0	1.19%	500.4	1.04%
Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer	NNNCTTTCCAGGAAA	1e0	-9.472e-01	0.7430	51.0	6.76%	3118.2	6.46%
USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer	SGTCACGTGR	1e0	-9.423e-01	0.7430	16.0	2.12%	934.3	1.94%
ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer	TGGGGAAGGGCM	1e0	-9.242e-01	0.7524	25.0	3.32%	1498.5	3.10%
p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer	NNDRCATGYCYNRRCATGYH	1e0	-9.236e-01	0.7524	11.0	1.46%	631.0	1.31%
p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer	RRCATGYCYRGRCATGYYYN	1e0	-9.188e-01	0.7524	3.0	0.40%	146.9	0.30%
p53(p53)/Saos-p53-ChIP-Seq/Homer	RRCATGYCYRGRCATGYYYN	1e0	-9.188e-01	0.7524	3.0	0.40%	146.9	0.30%
PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GCAGCCAAGCRTGACH	1e0	-9.138e-01	0.7524	11.0	1.46%	632.4	1.31%
Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer	CTAATKGV	1e0	-9.091e-01	0.7524	73.0	9.68%	4523.1	9.37%
Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer	GKVTCADRTTWC	1e0	-8.905e-01	0.7546	8.0	1.06%	452.3	0.94%
E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer	DNRCAGCTGY	1e0	-8.880e-01	0.7546	63.0	8.36%	3902.8	8.09%
Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer	RGKGGGCGGAGC	1e0	-8.769e-01	0.7572	25.0	3.32%	1513.6	3.14%
Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer	AGGTGTCA	1e0	-8.763e-01	0.7572	139.0	18.44%	8729.5	18.09%
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer	TWGTCTGV	1e0	-8.350e-01	0.7818	115.0	15.25%	7232.7	14.99%
PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer	RGGTCTCTAACY	1e0	-8.307e-01	0.7818	9.0	1.19%	525.5	1.09%
Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer	CVGTSCTCCC	1e0	-8.283e-01	0.7818	70.0	9.28%	4377.7	9.07%
Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer	CCATTGTATGCAAAT	1e0	-8.217e-01	0.7818	4.0	0.53%	217.7	0.45%
Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer	GCTATTTTTGGM	1e0	-8.169e-01	0.7818	25.0	3.32%	1533.2	3.18%
Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer	GKTAATGR	1e0	-8.130e-01	0.7818	102.0	13.53%	6420.1	13.30%
Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer	YTAATTRAWWCCAGATGT	1e0	-8.115e-01	0.7818	6.0	0.80%	342.3	0.71%
Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer	CCTGCTGAGH	1e0	-8.080e-01	0.7818	30.0	3.98%	1852.3	3.84%
Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	CTGGCAGSCTGCCA	1e0	-8.080e-01	0.7818	14.0	1.86%	843.7	1.75%
HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer	GCACGTACCC	1e0	-8.074e-01	0.7818	15.0	1.99%	906.1	1.88%
RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer	AGGTCAAGGTCA	1e0	-8.034e-01	0.7818	1.0	0.13%	38.7	0.08%
CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	NTNATGCAAYMNNHTGMAAY	1e0	-7.983e-01	0.7818	5.0	0.66%	282.6	0.59%
Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer	NGRTGACGTCAY	1e0	-7.820e-01	0.7818	16.0	2.12%	976.3	2.02%
CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer	CCATATATGGNM	1e0	-7.724e-01	0.7820	9.0	1.19%	537.2	1.11%
KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer	RGKGGGCGKGGC	1e0	-7.674e-01	0.7823	47.0	6.23%	2948.8	6.11%
RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer	TAGGGCAAAGGTCA	1e0	-7.612e-01	0.7835	37.0	4.91%	2315.4	4.80%
ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer	AACATCTGGA	1e0	-7.519e-01	0.7872	19.0	2.52%	1175.4	2.44%
HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer	TTTTATKRGG	1e0	-7.362e-01	0.7960	34.0	4.51%	2135.5	4.42%
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer	TRAGGTCA	1e0	-7.281e-01	0.7989	160.0	21.22%	10185.6	21.10%
Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer	CGGTCACSCCAC	1e0	-7.264e-01	0.7989	4.0	0.53%	230.0	0.48%
HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer	RTTATGYAAB	1e0	-7.086e-01	0.8072	27.0	3.58%	1700.9	3.52%
Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer	GATGACGTCA	1e0	-6.994e-01	0.8111	23.0	3.05%	1448.3	3.00%
Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATATTC	1e0	-6.939e-01	0.8119	3.0	0.40%	171.9	0.36%
HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer	TTCTAGAABNTTCTA	1e0	-6.919e-01	0.8119	7.0	0.93%	427.9	0.89%
Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	RGCCATTAAC	1e0	-6.767e-01	0.8187	172.0	22.81%	10999.1	22.79%
Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer	NGCGTGGGCGGR	1e0	-6.422e-01	0.8437	4.0	0.53%	244.0	0.51%
ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer	AGTTTCASTTTC	1e0	-6.142e-01	0.8638	2.0	0.27%	116.6	0.24%
Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	HTTTCCCASG	1e0	-5.991e-01	0.8731	52.0	6.90%	3361.6	6.96%
ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer	RGGGCACTAACY	1e0	-5.990e-01	0.8731	22.0	2.92%	1424.0	2.95%
ZNF41(Zf)/HEK293-ZNF41.GFP-ChIP-Seq(GSE58341)/Homer	CCTCATGGTGYCYTWYTCCCTTGTG	1e0	-5.989e-01	0.8731	1.0	0.13%	51.8	0.11%
Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer	ADBTAATTAR	1e0	-5.958e-01	0.8731	56.0	7.43%	3621.1	7.50%
PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer	GSCTGTCACTCA	1e0	-5.939e-01	0.8731	3.0	0.40%	185.7	0.38%
Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer	NNTGTGGATTSS	1e0	-5.849e-01	0.8731	20.0	2.65%	1299.9	2.69%
ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer	ANCAGGAAGT	1e0	-5.771e-01	0.8731	26.0	3.45%	1692.3	3.51%
TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer	CCWGGAATGY	1e0	-5.745e-01	0.8731	18.0	2.39%	1173.2	2.43%
YY1(Zf)/Promoter/Homer	CAAGATGGCGGC	1e0	-5.652e-01	0.8731	2.0	0.27%	122.6	0.25%
ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer	ARGAGGMCAAAATGW	1e0	-5.568e-01	0.8764	4.0	0.53%	258.1	0.53%
Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer	GTCATGCHTGRCTGS	1e0	-5.524e-01	0.8766	9.0	1.19%	591.0	1.22%
Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer	ACAGCTGTTN	1e0	-5.499e-01	0.8766	118.0	15.65%	7653.7	15.86%
Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer	GGCCYCCTGCTGDGH	1e0	-5.443e-01	0.8766	18.0	2.39%	1185.5	2.46%
ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer	AGGAARCAGCTG	1e0	-5.436e-01	0.8766	3.0	0.40%	193.8	0.40%
Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer	BSNTGTTTACWYWGN	1e0	-5.385e-01	0.8766	9.0	1.19%	595.8	1.23%
SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer	ASWTCCTGBT	1e0	-5.345e-01	0.8766	38.0	5.04%	2494.2	5.17%
c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer	VCCACGTG	1e0	-5.087e-01	0.8933	15.0	1.99%	1002.0	2.08%
VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer	ARAGGTCANWGAGTTCANNN	1e0	-5.019e-01	0.8958	5.0	0.66%	337.2	0.70%
STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer	ABTTCYYRRGAA	1e0	-4.783e-01	0.9134	17.0	2.25%	1148.0	2.38%
TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer	CCWGGAATGY	1e0	-4.755e-01	0.9134	29.0	3.85%	1940.2	4.02%
RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	GGGRAARRGRMCAGMTG	1e0	-4.716e-01	0.9134	10.0	1.33%	683.8	1.42%
PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer	ADGGYAGYAGCATCT	1e0	-4.439e-01	0.9341	15.0	1.99%	1029.9	2.13%
NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer	GGGGGAATCCCC	1e0	-4.421e-01	0.9341	2.0	0.27%	140.4	0.29%
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	KGTTGCCATGGCAA	1e0	-4.301e-01	0.9396	5.0	0.66%	355.7	0.74%
Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer	ASWTCAAAGG	1e0	-4.293e-01	0.9396	8.0	1.06%	562.9	1.17%
NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	ATTTTCCATT	1e0	-4.238e-01	0.9396	30.0	3.98%	2037.2	4.22%
EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer	AVCAGGAAGT	1e0	-3.891e-01	0.9673	46.0	6.10%	3119.4	6.46%
MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer	GCTGASTCAGCA	1e0	-3.890e-01	0.9673	6.0	0.80%	437.0	0.91%
PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer	TGACCTTTGCCCCA	1e0	-3.855e-01	0.9673	28.0	3.71%	1929.2	4.00%
Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGCATAATTCA	1e0	-3.815e-01	0.9673	8.0	1.06%	579.6	1.20%
IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	CTTTCANTATGACTV	1e0	-3.777e-01	0.9673	3.0	0.40%	226.5	0.47%
Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer	TGTTKCCTAGCAACM	1e0	-3.774e-01	0.9673	34.0	4.51%	2334.2	4.84%
COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer	AGRGGTCA	1e0	-3.657e-01	0.9675	55.0	7.29%	3733.4	7.74%
PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GTCACGCTCSCTGM	1e0	-3.654e-01	0.9675	3.0	0.40%	229.9	0.48%
EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer	GTCCCCWGGGGA	1e0	-3.616e-01	0.9675	30.0	3.98%	2079.4	4.31%
Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer	GTCACGTGGT	1e0	-3.458e-01	0.9757	9.0	1.19%	663.6	1.37%
ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	RGRACASNSTGTYCYB	1e0	-3.448e-01	0.9757	7.0	0.93%	523.9	1.09%
Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer	GGGGGGGG	1e0	-3.396e-01	0.9757	28.0	3.71%	1961.3	4.06%
ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer	VAGGTCACNSTGACC	1e0	-3.371e-01	0.9757	7.0	0.93%	526.4	1.09%
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	CACAGCAGGGGG	1e0	-3.367e-01	0.9757	18.0	2.39%	1287.6	2.67%
TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer	ACWTCAAAGG	1e0	-3.122e-01	0.9903	2.0	0.27%	166.0	0.34%
DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer	YDGHTACAWTGTADC	1e0	-3.068e-01	0.9920	4.0	0.53%	320.4	0.66%
EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer	ATTTCCTGTN	1e0	-2.937e-01	1.0000	23.0	3.05%	1657.7	3.43%
Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer	BTBRAGTGSN	1e0	-2.878e-01	1.0000	69.0	9.15%	4742.9	9.83%
Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer	NRAACCRGTTYRAACCRGYT	1e0	-2.865e-01	1.0000	3.0	0.40%	251.6	0.52%
NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer	KCCACGTGAC	1e0	-2.673e-01	1.0000	36.0	4.77%	2562.4	5.31%
ETS(ETS)/Promoter/Homer	AACCGGAAGT	1e0	-2.634e-01	1.0000	9.0	1.19%	703.5	1.46%
TATA-Box(TBP)/Promoter/Homer	CCTTTTAWAGSC	1e0	-2.610e-01	1.0000	37.0	4.91%	2636.1	5.46%
PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	MGGAAGTGAAAC	1e0	-2.596e-01	1.0000	43.0	5.70%	3043.0	6.30%
TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer	GAGGTCAAAGGTCA	1e0	-2.526e-01	1.0000	2.0	0.27%	182.5	0.38%
ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer	AAGGKGRCGCAGGCA	1e0	-2.480e-01	1.0000	3.0	0.40%	264.5	0.55%
ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer	GTGGGCCCCA	1e0	-2.396e-01	1.0000	2.0	0.27%	186.4	0.39%
EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer	NWGGGTGTGGCY	1e0	-2.241e-01	1.0000	4.0	0.53%	352.9	0.73%
CHR(?)/Hela-CellCycle-Expression/Homer	SRGTTTCAAA	1e0	-2.240e-01	1.0000	16.0	2.12%	1227.1	2.54%
CRE(bZIP)/Promoter/Homer	CSGTGACGTCAC	1e0	-2.180e-01	1.0000	5.0	0.66%	432.9	0.90%
Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer	AGGVNCCTTTGT	1e0	-2.082e-01	1.0000	24.0	3.18%	1801.7	3.73%
Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer	RAACAATGGN	1e0	-2.046e-01	1.0000	29.0	3.85%	2151.8	4.46%
Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer	GGTTAAWCATTAA	1e0	-1.993e-01	1.0000	2.0	0.27%	200.2	0.41%
ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer	WDNCTGGGCA	1e0	-1.862e-01	1.0000	41.0	5.44%	2998.2	6.21%
Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer	CCCCTCCCCCAC	1e0	-1.794e-01	1.0000	2.0	0.27%	208.9	0.43%
NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	SARTGGAAAAWRTGAGTCAB	1e0	-1.754e-01	1.0000	3.0	0.40%	295.6	0.61%
OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAACAATG	1e0	-1.754e-01	1.0000	3.0	0.40%	296.0	0.61%
TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer	YCWGGAATGY	1e0	-1.696e-01	1.0000	19.0	2.52%	1491.7	3.09%
DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer	TWGHWACAWTGTWDC	1e0	-1.595e-01	1.0000	4.0	0.53%	386.9	0.80%
HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer	GTTAATNATTAA	1e0	-1.573e-01	1.0000	2.0	0.27%	218.2	0.45%
GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer	AAACYKGTTWDACMRGTTTB	1e0	-1.537e-01	1.0000	8.0	1.06%	703.6	1.46%
Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer	TTRAGTGSYK	1e0	-1.494e-01	1.0000	72.0	9.55%	5166.0	10.70%
Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer	CCATTGTTYB	1e0	-1.365e-01	1.0000	18.0	2.39%	1459.1	3.02%
ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer	GARTGGTCATCGCCC	1e0	-1.290e-01	1.0000	1.0	0.13%	135.9	0.28%
GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer	RACCGGAAGT	1e0	-1.283e-01	1.0000	27.0	3.58%	2114.9	4.38%
ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer	ATTTCCCAGVAKSCY	1e0	-1.247e-01	1.0000	6.0	0.80%	573.0	1.19%
Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer	SSCMATWAAA	1e0	-1.231e-01	1.0000	15.0	1.99%	1258.7	2.61%
IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer	GAAASYGAAASY	1e0	-1.194e-01	1.0000	2.0	0.27%	239.8	0.50%
GFY(?)/Promoter/Homer	ACTACAATTCCC	1e0	-1.187e-01	1.0000	1.0	0.13%	140.1	0.29%
IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer	ACTGAAACCA	1e0	-1.144e-01	1.0000	11.0	1.46%	971.2	2.01%
CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer	GHCACGTG	1e0	-1.102e-01	1.0000	15.0	1.99%	1276.5	2.64%
TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer	GTCACGTGACYV	1e0	-1.092e-01	1.0000	1.0	0.13%	145.5	0.30%
IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer	AGTTTCAKTTTC	1e0	-1.035e-01	1.0000	6.0	0.80%	594.9	1.23%
RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer	CGGTTGCCATGGCAAC	1e0	-9.729e-02	1.0000	1.0	0.13%	152.3	0.32%
Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer	RRSCACTYAA	1e0	-9.726e-02	1.0000	74.0	9.81%	5434.7	11.26%
ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer	AACCGGAAGT	1e0	-9.668e-02	1.0000	43.0	5.70%	3302.4	6.84%
Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer	CCATTGTTNY	1e0	-8.957e-02	1.0000	46.0	6.10%	3530.6	7.32%
PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	AGAGGAAGTG	1e0	-8.776e-02	1.0000	12.0	1.59%	1085.5	2.25%
HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer	BSTTCTRGAABVTTCYAGAA	1e0	-8.256e-02	1.0000	2.0	0.27%	267.5	0.55%
LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer	AAGACCCYYN	1e0	-7.966e-02	1.0000	34.0	4.51%	2712.0	5.62%
Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer	CCWTTGTYYB	1e0	-7.787e-02	1.0000	48.0	6.37%	3704.4	7.68%
Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer	GTTGCCATGGCAACM	1e0	-7.610e-02	1.0000	1.0	0.13%	167.2	0.35%
Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer	RSCACTYRAG	1e0	-7.245e-02	1.0000	98.0	13.00%	7154.3	14.82%
HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer	NCYAATAAAA	1e0	-7.024e-02	1.0000	24.0	3.18%	2016.4	4.18%
KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer	MKGGGYGTGGCC	1e0	-6.183e-02	1.0000	20.0	2.65%	1743.7	3.61%
Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer	VCAKCTGGNNNCCAGMTGBN	1e0	-5.403e-02	1.0000	2.0	0.27%	299.1	0.62%
IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer	GAAAGTGAAAGT	1e0	-5.261e-02	1.0000	2.0	0.27%	301.0	0.62%
Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer	AGGTGHCAGACA	1e0	-5.181e-02	1.0000	3.0	0.40%	401.2	0.83%
Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer	GCCACRCCCACY	1e0	-5.061e-02	1.0000	4.0	0.53%	496.3	1.03%
Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer	CYAAAAATAG	1e0	-4.822e-02	1.0000	7.0	0.93%	762.9	1.58%
PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	GGAAGTGAAAST	1e0	-4.549e-02	1.0000	3.0	0.40%	412.3	0.85%
KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer	NRGCCCCRCCCHBNN	1e0	-4.452e-02	1.0000	5.0	0.66%	598.2	1.24%
Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer	TAATTAGN	1e0	-4.422e-02	1.0000	26.0	3.45%	2247.6	4.66%
Sp1(Zf)/Promoter/Homer	GGCCCCGCCCCC	1e0	-3.866e-02	1.0000	1.0	0.13%	209.0	0.43%
ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer	GAGSCCGAGC	1e0	-3.768e-02	1.0000	2.0	0.27%	326.9	0.68%
Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer	NNYTAATTAR	1e0	-3.648e-02	1.0000	26.0	3.45%	2281.3	4.73%
ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer	GAGCCTGGTACTGWGCCTGR	1e0	-3.494e-02	1.0000	4.0	0.53%	531.0	1.10%
ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer	NGNTCTAGAACCNGV	1e0	-3.483e-02	1.0000	6.0	0.80%	711.6	1.47%
KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer	DGGGYGKGGC	1e0	-3.005e-02	1.0000	24.0	3.18%	2164.9	4.49%
E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	NVCACCTGBN	1e0	-2.800e-02	1.0000	46.0	6.10%	3794.5	7.86%
Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer	BCCATTGTTC	1e0	-2.610e-02	1.0000	18.0	2.39%	1726.1	3.58%
PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer	ACTTTCACTTTC	1e0	-2.524e-02	1.0000	11.0	1.46%	1171.3	2.43%
Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer	GTRGGTCASTGGGTCA	1e0	-1.981e-02	1.0000	1.0	0.13%	251.6	0.52%
Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer	YCTTTGTTCC	1e0	-1.969e-02	1.0000	18.0	2.39%	1767.6	3.66%
bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer	KCACGTGMCN	1e0	-1.553e-02	1.0000	5.0	0.66%	699.3	1.45%
IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer	GRAASTGAAAST	1e0	-1.440e-02	1.0000	5.0	0.66%	706.2	1.46%
ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer	AVCCGGAAGT	1e0	-1.340e-02	1.0000	10.0	1.33%	1162.5	2.41%
AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer	ATGCCCTGAGGC	1e0	-1.243e-02	1.0000	14.0	1.86%	1507.4	3.12%
NRF(NRF)/Promoter/Homer	STGCGCATGCGC	1e0	-1.157e-02	1.0000	1.0	0.13%	285.7	0.59%
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer	SCCTAGCAACAG	1e0	-1.116e-02	1.0000	4.0	0.53%	631.7	1.31%
ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer	VCAGGTRDRY	1e0	-9.911e-03	1.0000	54.0	7.16%	4586.4	9.50%
Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer	GCCACACCCA	1e0	-7.411e-03	1.0000	3.0	0.40%	560.4	1.16%
Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer	GGGGCTYGKCTGGGA	1e0	-6.868e-03	1.0000	1.0	0.13%	318.0	0.66%
Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer	CCWTTGTY	1e0	-1.974e-03	1.0000	40.0	5.31%	3828.2	7.93%
AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer	SCCTSAGGSCAW	1e0	-6.680e-04	1.0000	16.0	2.12%	2024.9	4.20%
DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer	NWTAAYCYAATCAWN	1e0	0.000e+00	1.0000	0.0	0.00%	78.3	0.16%
GFX(?)/Promoter/Homer	ATTCTCGCGAGA	1e0	0.000e+00	1.0000	0.0	0.00%	20.9	0.04%
GFY-Staf(?,Zf)/Promoter/Homer	RACTACAATTCCCAGAAKGC	1e0	0.000e+00	1.0000	0.0	0.00%	100.6	0.21%
LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer	RGGTTACTANAGGTCA	1e0	0.000e+00	1.0000	0.0	0.00%	75.4	0.16%
NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer	CTGCGCATGCGC	1e0	0.000e+00	1.0000	0.0	0.00%	160.9	0.33%
OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATWATTCATGA	1e0	0.000e+00	1.0000	0.0	0.00%	29.6	0.06%
Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCHGATTAC	1e0	0.000e+00	1.0000	0.0	0.00%	32.2	0.07%
REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer	GGMGCTGTCCATGGTGCTGA	1e0	0.000e+00	1.0000	0.0	0.00%	24.9	0.05%
Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer	RACTACAACTCCCAGVAKGC	1e0	0.000e+00	1.0000	0.0	0.00%	72.0	0.15%
T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer	ACTTTCGTTTCT	1e0	0.000e+00	1.0000	0.0	0.00%	21.9	0.05%
ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer	GGVTCTCGCGAGAAC	1e0	0.000e+00	1.0000	0.0	0.00%	52.6	0.11%
ZFP3(Zf)/HEK293-ZFP3.GFP-ChIP-Seq(GSE58341)/Homer	GGGTTTTGAAGGATGARTAGGAGTT	1e0	0.000e+00	1.0000	0.0	0.00%	4.5	0.01%
ZNF136(Zf)/HEK293-ZNF136.GFP-ChIP-Seq(GSE58341)/Homer	YTKGATAHAGTATTCTWGGTNGGCA	1e0	0.000e+00	1.0000	0.0	0.00%	152.1	0.32%
ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer	MACCTTCYATGGCTCCCTAKTGCCY	1e0	0.000e+00	1.0000	0.0	0.00%	19.4	0.04%
ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer	GNCTGTASTRNTGBCTCHTT	1e0	0.000e+00	1.0000	0.0	0.00%	44.3	0.09%
ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer	AGAAATGACTTCCCT	1e0	0.000e+00	1.0000	0.0	0.00%	16.1	0.03%