Information for 6-MCATCCTKCAGARGGG (Motif 7)

G T C A G T A C C G T A A G C T G T A C G T A C A C G T A C G T A T G C C T G A T A C G G C T A C T A G A C T G C T A G A C T G
Reverse Opposite:
G T A C A G T C A G T C A G T C C G A T A T G C A G C T A T C G G T C A C G T A A C T G A C T G C T G A A C G T A C T G C A G T
p-value:1e-13
log p-value:-3.002e+01
Information Content per bp:1.746
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.4 +/- 27.0bp
Average Position of motif in Background50.0 +/- 20.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:1
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-MCATCCTKCAGARGGG
GYCATCMATCAT-----
 A C G T G T C A G T A C C G T A A G C T G T A C G T A C A C G T A C G T A T G C C T G A T A C G G C T A C T A G A C T G C T A G A C T G
T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T A C G T A C G T A C G T A C G T A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.55
Offset:0
Orientation:forward strand
Alignment:MCATCCTKCAGARGGG
ACATCCTGNT------
 G T C A G T A C C G T A A G C T G T A C G T A C A C G T A C G T A T G C C T G A T A C G G C T A C T A G A C T G C T A G A C T G
C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T A C G T A C G T A C G T A C G T A C G T A C G T

PBX1/MA0070.1/Jaspar

Match Rank:3
Score:0.55
Offset:0
Orientation:forward strand
Alignment:MCATCCTKCAGARGGG
CCATCAATCAAA----
 G T C A G T A C C G T A A G C T G T A C G T A C A C G T A C G T A T G C C T G A T A C G G C T A C T A G A C T G C T A G A C T G
G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A A C G T A C G T A C G T A C G T

PB0181.1_Spdef_2/Jaspar

Match Rank:4
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----MCATCCTKCAGARGGG
GATAACATCCTAGTAG----
 A C G T A C G T A C G T A C G T G T C A G T A C C G T A A G C T G T A C G T A C A C G T A C G T A T G C C T G A T A C G G C T A C T A G A C T G C T A G A C T G
C T A G C G T A A C G T G C T A C T G A A G T C C G T A C G A T G A T C A G T C A G C T G C T A A C T G G C A T C G T A T C A G A C G T A C G T A C G T A C G T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:5
Score:0.54
Offset:0
Orientation:forward strand
Alignment:MCATCCTKCAGARGGG
TCATCAATCA------
 G T C A G T A C C G T A A G C T G T A C G T A C A C G T A C G T A T G C C T G A T A C G G C T A C T A G A C T G C T A G A C T G
G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:6
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---MCATCCTKCAGARGGG
ACCACATCCTGT-------
 A C G T A C G T A C G T G T C A G T A C C G T A A G C T G T A C G T A C A C G T A C G T A T G C C T G A T A C G G C T A C T A G A C T G C T A G A C T G
T G C A A G T C A G T C C G T A A G T C C G T A A C G T A G T C A G T C C A G T A T C G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0176.1_Sox5_2/Jaspar

Match Rank:7
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--MCATCCTKCAGARGGG
TATCATAATTAAGGA---
 A C G T A C G T G T C A G T A C C G T A A G C T G T A C G T A C A C G T A C G T A T G C C T G A T A C G G C T A C T A G A C T G C T A G A C T G
C G A T G C T A C G A T A G T C C T G A C A G T T G C A G C T A G C A T G A C T C G T A T G C A T A C G C A T G C G T A A C G T A C G T A C G T

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:8
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--MCATCCTKCAGARGGG
RGCCATYAATCA------
 A C G T A C G T G T C A G T A C C G T A A G C T G T A C G T A C A C G T A C G T A T G C C T G A T A C G G C T A C T A G A C T G C T A G A C T G
C T A G T A C G G A T C T G A C T C G A A C G T G A C T G C T A T C G A A G C T G A T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---MCATCCTKCAGARGGG
AAGATATCCTT--------
 A C G T A C G T A C G T G T C A G T A C C G T A A G C T G T A C G T A C A C G T A C G T A T G C C T G A T A C G G C T A C T A G A C T G C T A G A C T G
G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:10
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--MCATCCTKCAGARGGG
NNCATTCATTCATNNN--
 A C G T A C G T G T C A G T A C C G T A A G C T G T A C G T A C A C G T A C G T A T G C C T G A T A C G G C T A C T A G A C T G C T A G A C T G
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T A C G T A C G T