Information for 5-ANGGGAATTGTCCMTW (Motif 6)

C G T A C T A G C T A G C T A G T C A G C T G A C T G A C A G T A C G T T A C G A G C T A G T C A G T C G T C A G A C T C G T A
Reverse Opposite:
G C A T C T G A C A G T A C T G C T A G T C G A A T G C T G C A G C T A G A C T A G C T A G T C G A T C A G T C G A T C C G A T
p-value:1e-13
log p-value:-3.011e+01
Information Content per bp:1.617
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.99%
Number of Background Sequences with motif59.3
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets44.4 +/- 26.5bp
Average Position of motif in Background55.9 +/- 22.4bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:1
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:ANGGGAATTGTCCMTW
--GGGAAATCCCCN--
 C G T A C T A G C T A G C T A G T C A G C T G A C T G A C A G T A C G T T A C G A G C T A G T C A G T C G T C A G A C T C G T A
A C G T A C G T C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T A C G T A C G T

NFKB2/MA0778.1/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:ANGGGAATTGTCCMTW
-AGGGGATTCCCCT--
 C G T A C T A G C T A G C T A G T C A G C T G A C T G A C A G T A C G T T A C G A G C T A G T C A G T C G T C A G A C T C G T A
A C G T T G C A T C A G A C T G C A T G C T A G T G C A G C A T G A C T G A T C G T A C G A T C G A T C A G C T A C G T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:3
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:ANGGGAATTGTCCMTW
--GGGGATTCCCCC--
 C G T A C T A G C T A G C T A G T C A G C T G A C T G A C A G T A C G T T A C G A G C T A G T C A G T C G T C A G A C T C G T A
A C G T A C G T A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:ANGGGAATTGTCCMTW
--GGGAATTTCC----
 C G T A C T A G C T A G C T A G T C A G C T G A C T G A C A G T A C G T T A C G A G C T A G T C A G T C G T C A G A C T C G T A
A C G T A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T A C G T A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:5
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:ANGGGAATTGTCCMTW
---GGAAANCCCC---
 C G T A C T A G C T A G C T A G T C A G C T G A C T G A C A G T A C G T T A C G A G C T A G T C A G T C G T C A G A C T C G T A
A C G T A C G T A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C A C G T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:6
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:ANGGGAATTGTCCMTW
---GGAAATCCCC---
 C G T A C T A G C T A G C T A G T C A G C T G A C T G A C A G T A C G T T A C G A G C T A G T C A G T C G T C A G A C T C G T A
A C G T A C G T A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T A C G T A C G T

RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:ANGGGAATTGTCCMTW--
-GGGRAARRGRMCAGMTG
 C G T A C T A G C T A G C T A G T C A G C T G A C T G A C A G T A C G T T A C G A G C T A G T C A G T C G T C A G A C T C G T A A C G T A C G T
A C G T C A T G A C T G C T A G T C G A T C G A T C G A T C G A T C A G T C A G T C A G T G A C T G A C C G T A A C T G T G C A C G A T A C T G

RELA/MA0107.1/Jaspar

Match Rank:8
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:ANGGGAATTGTCCMTW
---GGAAATTCCC---
 C G T A C T A G C T A G C T A G T C A G C T G A C T G A C A G T A C G T T A C G A G C T A G T C A G T C G T C A G A C T C G T A
A C G T A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T A C G T A C G T

SPIB/MA0081.1/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ANGGGAATTGTCCMTW
AGAGGAA---------
 C G T A C T A G C T A G C T A G T C A G C T G A C T G A C A G T A C G T T A C G A G C T A G T C A G T C G T C A G A C T C G T A
C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--ANGGGAATTGTCCMTW
AAAGRGGAAGTG------
 A C G T A C G T C G T A C T A G C T A G C T A G T C A G C T G A C T G A C A G T A C G T T A C G A G C T A G T C A G T C G T C A G A C T C G T A
C G T A C T G A C G T A C T A G T C G A C T A G A C T G C G T A C G T A T A C G A G C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T