Information for 24-GCCATACTGTGYT (Motif 44)

A C T G A G T C A G T C C G T A G A C T C G T A T A G C A C G T A C T G A C G T A C T G G A C T A C G T
Reverse Opposite:
G T C A C T G A G T A C G T C A T G A C G T C A A T C G A C G T C T G A C G A T A C T G T A C G G T A C
p-value:1e-7
log p-value:-1.635e+01
Information Content per bp:1.683
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.59%
Number of Background Sequences with motif98.4
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets60.5 +/- 19.4bp
Average Position of motif in Background43.9 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0207.1_Zic3_2/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GCCATACTGTGYT-
NNTCCTGCTGTGNNN
 A C G T A C T G A G T C A G T C C G T A G A C T C G T A T A G C A C G T A C T G A C G T A C T G G A C T A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

PB0206.1_Zic2_2/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCCATACTGTGYT-
TCNCCTGCTGNGNNN
 A C G T A C T G A G T C A G T C C G T A G A C T C G T A T A G C A C G T A C T G A C G T A C T G G A C T A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

PB0205.1_Zic1_2/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCCATACTGTGYT-
TNTCCTGCTGTGNNG
 A C G T A C T G A G T C A G T C C G T A G A C T C G T A T A G C A C G T A C T G A C G T A C T G G A C T A C G T A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

YY1/MA0095.2/Jaspar

Match Rank:4
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GCCATACTGTGYT
GCNGCCATCTTG----
 A C G T A C G T A C G T A C T G A G T C A G T C C G T A G A C T C G T A T A G C A C G T A C T G A C G T A C T G G A C T A C G T
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GCCATACTGTGYT
--CCTGCTGAGH-
 A C T G A G T C A G T C C G T A G A C T C G T A T A G C A C G T A C T G A C G T A C T G G A C T A C G T
A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GCCATACTGTGYT
CGTGCCAAG-------
 A C G T A C G T A C G T A C T G A G T C A G T C C G T A G A C T C G T A T A G C A C G T A C T G A C G T A C T G G A C T A C G T
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GCCATACTGTGYT
TGCCAA--------
 A C G T A C T G A G T C A G T C C G T A G A C T C G T A T A G C A C G T A C T G A C G T A C T G G A C T A C G T
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GCCATACTGTGYT--
NGTCACGCTTGGCTGC
 A C G T A C T G A G T C A G T C C G T A G A C T C G T A T A G C A C G T A C T G A C G T A C T G G A C T A C G T A C G T A C G T
C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C

PAX5/MA0014.2/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GCCATACTGTGYT------
GTCACGCTTGGCTGCNCNN
 A C T G A G T C A G T C C G T A G A C T C G T A T A G C A C G T A C T G A C G T A C T G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A T G G A C T A G T C G T C A G A T C T C A G T A G C G A C T A G C T A T C G T C A G A T G C G A C T C T A G T G A C G A T C A G T C G C A T A G T C

Neurog1/MA0623.1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GCCATACTGTGYT
ACCATATGGT---
 A C T G A G T C A G T C C G T A G A C T C G T A T A G C A C G T A C T G A C G T A C T G G A C T A C G T
T C G A T G A C G T A C C T G A A C G T T G C A G A C T A C T G A T C G G A C T A C G T A C G T A C G T