Information for 22-CCTATCTCCKCCC (Motif 41)

A G T C A G T C G A C T G C T A C G A T A G T C A C G T A G T C G A T C C A G T A T G C G T A C G A T C
Reverse Opposite:
C T A G A C T G A T C G G T C A C A T G T C A G C G T A A C T G C G T A C G A T C G T A A C T G A C T G
p-value:1e-7
log p-value:-1.762e+01
Information Content per bp:1.802
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.33%
Number of Background Sequences with motif54.9
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets59.8 +/- 21.7bp
Average Position of motif in Background51.5 +/- 20.5bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0137.1_Irf3_2/Jaspar

Match Rank:1
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----CCTATCTCCKCCC
NNGCACCTTTCTCC----
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C G A C T G C T A C G A T A G T C A C G T A G T C G A T C C A G T A T G C G T A C G A T C
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C A C G T A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:2
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:CCTATCTCCKCCC---
----GCTCCGCCCMCY
 A G T C A G T C G A C T G C T A C G A T A G T C A C G T A G T C G A T C C A G T A T G C G T A C G A T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

Gata4/MA0482.1/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CCTATCTCCKCCC
TCTTATCTCCC---
 A C G T A G T C A G T C G A C T G C T A C G A T A G T C A C G T A G T C G A T C C A G T A T G C G T A C G A T C
A G C T A T G C A G C T A C G T G T C A A C G T A G T C C G A T A T G C G A T C A G T C A C G T A C G T A C G T

PB0107.1_Ascl2_2/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CCTATCTCCKCCC----
-CTATCCCCGCCCTATT
 A G T C A G T C G A C T G C T A C G A T A G T C A C G T A G T C G A T C C A G T A T G C G T A C G A T C A C G T A C G T A C G T A C G T
A C G T A T G C G A C T T G C A C G A T G T A C T A G C G T A C T G A C C T A G A G T C G A T C G A T C A G C T C T G A A C G T G A C T

Gata1/MA0035.3/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CCTATCTCCKCCC
TTCTTATCTGT----
 A C G T A C G T A G T C A G T C G A C T G C T A C G A T A G T C A C G T A G T C G A T C C A G T A T G C G T A C G A T C
A G C T A G C T A G T C A G C T A C G T C G T A A C G T A G T C C G A T A T C G G A C T A C G T A C G T A C G T A C G T

SP1/MA0079.3/Jaspar

Match Rank:6
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CCTATCTCCKCCC--
----GCCCCGCCCCC
 A G T C A G T C G A C T G C T A C G A T A G T C A C G T A G T C G A T C C A G T A T G C G T A C G A T C A C G T A C G T
A C G T A C G T A C G T A C G T A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CCTATCTCCKCCC
NNCTTATCTN-----
 A C G T A C G T A G T C A G T C G A C T G C T A C G A T A G T C A C G T A G T C G A T C C A G T A T G C G T A C G A T C
A G C T A G T C A T G C A G C T A C G T C G T A A C G T A G T C C G A T A T G C A C G T A C G T A C G T A C G T A C G T

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CCTATCTCCKCCC
NCCTTATCTG-----
 A C G T A C G T A G T C A G T C G A C T G C T A C G A T A G T C A C G T A G T C G A T C C A G T A T G C G T A C G A T C
A G C T A G T C A T G C A C G T A C G T C G T A A C G T A G T C C G A T A T C G A C G T A C G T A C G T A C G T A C G T

GATA3/MA0037.2/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CCTATCTCCKCCC
TCTTATCT------
 A C G T A G T C A G T C G A C T G C T A C G A T A G T C A C G T A G T C G A T C C A G T A T G C G T A C G A T C
A G C T A G T C A C G T A C G T C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GATA2/MA0036.2/Jaspar

Match Rank:10
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----CCTATCTCCKCCC
AGATTCTTATCTGT----
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C G A C T G C T A C G A T A G T C A C G T A G T C G A T C C A G T A T G C G T A C G A T C
C G T A C T A G C T G A G C A T A G C T A T G C A G C T C G A T C G T A A C G T A G T C C G A T A T C G G C A T A C G T A C G T A C G T A C G T