Information for 3-AGACTTGTGTYTTTCT (Motif 4)

C G T A C T A G C T G A A T G C C G A T A C G T C T A G A C G T A C T G C G A T G A T C C G A T C A G T A C G T A G T C A G C T
Reverse Opposite:
C T G A C T A G G T C A G C T A C G T A C T A G C G T A G T A C G T C A A G T C C G T A C G T A A T C G A G C T A G T C A C G T
p-value:1e-13
log p-value:-3.157e+01
Information Content per bp:1.736
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.5 +/- 23.6bp
Average Position of motif in Background46.4 +/- 15.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:AGACTTGTGTYTTTCT
AAGCTTG---------
 C G T A C T A G C T G A A T G C C G A T A C G T C T A G A C G T A C T G C G A T G A T C C G A T C A G T A C G T A G T C A G C T
C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NEUROG2/MA0669.1/Jaspar

Match Rank:2
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:AGACTTGTGTYTTTCT
-GACATATGTT-----
 C G T A C T A G C T G A A T G C C G A T A C G T C T A G A C G T A C T G C G A T G A T C C G A T C A G T A C G T A G T C A G C T
A C G T C T A G T C G A A G T C C G T A A C G T T G C A A G C T C T A G A C G T A G C T A C G T A C G T A C G T A C G T A C G T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:3
Score:0.52
Offset:1
Orientation:forward strand
Alignment:AGACTTGTGTYTTTCT
-RTCATGTGAC-----
 C G T A C T A G C T G A A T G C C G A T A C G T C T A G A C G T A C T G C G A T G A T C C G A T C A G T A C G T A G T C A G C T
A C G T T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C A C G T A C G T A C G T A C G T A C G T

HLTF/MA0109.1/Jaspar

Match Rank:4
Score:0.51
Offset:0
Orientation:forward strand
Alignment:AGACTTGTGTYTTTCT
AACCTTATAT------
 C G T A C T A G C T G A A T G C C G A T A C G T C T A G A C G T A C T G C G A T G A T C C G A T C A G T A C G T A G T C A G C T
C G T A G C T A G T A C A G T C C G A T A C G T C G T A A C G T T C G A G A C T A C G T A C G T A C G T A C G T A C G T A C G T

PB0165.1_Sox11_2/Jaspar

Match Rank:5
Score:0.51
Offset:0
Orientation:forward strand
Alignment:AGACTTGTGTYTTTCT
AAAATTGTTATGAA--
 C G T A C T A G C T G A A T G C C G A T A C G T C T A G A C G T A C T G C G A T G A T C C G A T C A G T A C G T A G T C A G C T
C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A A C G T A C G T

BHLHE23/MA0817.1/Jaspar

Match Rank:6
Score:0.51
Offset:0
Orientation:forward strand
Alignment:AGACTTGTGTYTTTCT
AAACATATGTTT----
 C G T A C T A G C T G A A T G C C G A T A C G T C T A G A C G T A C T G C G A T G A T C C G A T C A G T A C G T A G T C A G C T
C G T A T C G A T G C A G T A C C T G A A G C T T G C A G A C T A C T G A C G T G A C T C G A T A C G T A C G T A C G T A C G T

PH0086.1_Irx5/Jaspar

Match Rank:7
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---AGACTTGTGTYTTTCT
AATATACATGTAAAATT--
 A C G T A C G T A C G T C G T A C T A G C T G A A T G C C G A T A C G T C T A G A C G T A C T G C G A T G A T C C G A T C A G T A C G T A G T C A G C T
C G A T C G T A C G A T G C T A C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A G T C A C G T A C G T A A C G T C G A T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:8
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:AGACTTGTGTYTTTCT
---NNTGTGGTTT---
 C G T A C T A G C T G A A T G C C G A T A C G T C T A G A C G T A C T G C G A T G A T C C G A T C A G T A C G T A G T C A G C T
A C G T A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:9
Score:0.50
Offset:2
Orientation:forward strand
Alignment:AGACTTGTGTYTTTCT
--ACTTTCGTTTCT--
 C G T A C T A G C T G A A T G C C G A T A C G T C T A G A C G T A C T G C G A T G A T C C G A T C A G T A C G T A G T C A G C T
A C G T A C G T T G C A A T G C A C G T A C G T A C G T A T G C C T A G A C G T A C G T A G C T G A T C A G C T A C G T A C G T

PH0082.1_Irx2/Jaspar

Match Rank:10
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---AGACTTGTGTYTTTCT
TAAATACATGTAAAATT--
 A C G T A C G T A C G T C G T A C T A G C T G A A T G C C G A T A C G T C T A G A C G T A C T G C G A T G A T C C G A T C A G T A C G T A G T C A G C T
C G A T C G T A C G T A C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A C G T A C T G A C G T A A C G T G C A T A C G T A C G T