Information for 21-TYTCTKAAAAMAA (Motif 37)

A C G T A G C T G A C T A G T C C G A T C A G T C G T A T C G A G T C A C G T A T G A C G T C A T C G A
Reverse Opposite:
A G C T A C G T A C T G A C G T A C G T A G C T G C A T G T C A C G T A T C A G C T G A T C G A C G T A
p-value:1e-7
log p-value:-1.820e+01
Information Content per bp:1.628
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif3.58%
Number of Background Sequences with motif466.6
Percentage of Background Sequences with motif0.97%
Average Position of motif in Targets55.0 +/- 24.2bp
Average Position of motif in Background49.8 +/- 25.8bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Stat6/MA0520.1/Jaspar

Match Rank:1
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TYTCTKAAAAMAA
CATTTCCTGAGAAAT-
 A C G T A C G T A C G T A C G T A G C T G A C T A G T C C G A T C A G T C G T A T C G A G T C A C G T A T G A C G T C A T C G A
A T G C C G T A A G C T A C G T C G A T G T A C G A T C C G A T T A C G C T G A C A T G C G T A C T G A T G C A G A C T A C G T

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TYTCTKAAAAMAA
TTCCKNAGAA---
 A C G T A G C T G A C T A G T C C G A T C A G T C G T A T C G A G T C A C G T A T G A C G T C A T C G A
G A C T C A G T G A T C G A T C A C G T G A T C C T G A T A C G C G T A G T C A A C G T A C G T A C G T

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TYTCTKAAAAMAA
NTTTCTNAGAAA--
 A C G T A C G T A G C T G A C T A G T C C G A T C A G T C G T A T C G A G T C A C G T A T G A C G T C A T C G A
C T G A A C G T A C G T A C G T A G T C G A C T C G A T C T G A A C T G C G T A C G T A T C G A A C G T A C G T

PB0067.1_Sox18_1/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TYTCTKAAAAMAA-----
--NNTNANAACAATTNNA
 A C G T A G C T G A C T A G T C C G A T C A G T C G T A T C G A G T C A C G T A T G A C G T C A T C G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A

PB0062.1_Sox12_1/Jaspar

Match Rank:5
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TYTCTKAAAAMAA---
--NTTNAGAACAATTA
 A C G T A G C T G A C T A G T C C G A T C A G T C G T A T C G A G T C A C G T A T G A C G T C A T C G A A C G T A C G T A C G T
A C G T A C G T C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TYTCTKAAAAMAA--
-TACTGGAAAAAAAA
 A C G T A G C T G A C T A G T C C G A T C A G T C G T A T C G A G T C A C G T A T G A C G T C A T C G A A C G T A C G T
A C G T G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A

PB0183.1_Sry_2/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TYTCTKAAAAMAA------
--TCACGGAACAATAGGTG
 A C G T A G C T G A C T A G T C C G A T C A G T C G T A T C G A G T C A C G T A T G A C G T C A T C G A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T G A T C C G T A G T A C C A T G T C A G T G C A C G T A A G T C C T G A C G T A G C A T C T G A C T A G T C A G G A C T T A C G

PB0116.1_Elf3_2/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TYTCTKAAAAMAA----
GTTCAAAAAAAAAATTC
 A C G T A G C T G A C T A G T C C G A T C A G T C G T A T C G A G T C A C G T A T G A C G T C A T C G A A C G T A C G T A C G T A C G T
C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C

SRY/MA0084.1/Jaspar

Match Rank:9
Score:0.59
Offset:5
Orientation:forward strand
Alignment:TYTCTKAAAAMAA-
-----GTAAACAAT
 A C G T A G C T G A C T A G T C C G A T C A G T C G T A T C G A G T C A C G T A T G A C G T C A T C G A A C G T
A C G T A C G T A C G T A C G T A C G T A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:10
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:TYTCTKAAAAMAA---
------RNAACAATGG
 A C G T A G C T G A C T A G T C C G A T C A G T C G T A T C G A G T C A C G T A T G A C G T C A T C G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G