Information for 20-CGCAGGCTGTATT (Motif 36)

G T A C C T A G A T G C C G T A C T A G A T C G G A T C A C G T A C T G A G C T C T G A C G A T G C A T
Reverse Opposite:
C G T A G C T A A G C T C T G A A G T C C G T A C A T G A T G C A G T C C G A T A T C G A G T C C A T G
p-value:1e-7
log p-value:-1.831e+01
Information Content per bp:1.685
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.39%
Number of Background Sequences with motif209.2
Percentage of Background Sequences with motif0.43%
Average Position of motif in Targets50.4 +/- 27.8bp
Average Position of motif in Background48.2 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.66
Offset:5
Orientation:forward strand
Alignment:CGCAGGCTGTATT
-----GCTGTG--
 G T A C C T A G A T G C C G T A C T A G A T C G G A T C A C G T A C T G A G C T C T G A C G A T G C A T
A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:CGCAGGCTGTATT
----NGCTN----
 G T A C C T A G A T G C C G T A C T A G A T C G G A T C A C G T A C T G A G C T C T G A C G A T G C A T
A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CGCAGGCTGTATT
--TWGTCTGV---
 G T A C C T A G A T G C C G T A C T A G A T C G G A T C A C G T A C T G A G C T C T G A C G A T G C A T
A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CGCAGGCTGTATT-
NNTCCTGCTGTGNNN
 A C G T G T A C C T A G A T G C C G T A C T A G A T C G G A T C A C G T A C T G A G C T C T G A C G A T G C A T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

PH0158.1_Rhox11_2/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CGCAGGCTGTATT----
AGGACGCTGTAAAGGGA
 G T A C C T A G A T G C C G T A C T A G A T C G G A T C A C G T A C T G A G C T C T G A C G A T G C A T A C G T A C G T A C G T A C G T
C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A

Rhox11/MA0629.1/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CGCAGGCTGTATT----
AAGACGCTGTAAAGCGA
 G T A C C T A G A T G C C G T A C T A G A T C G G A T C A C G T A C T G A G C T C T G A C G A T G C A T A C G T A C G T A C G T A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PH0157.1_Rhox11_1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CGCAGGCTGTATT----
AAGACGCTGTAAAGCGA
 G T A C C T A G A T G C C G T A C T A G A T C G G A T C A C G T A C T G A G C T C T G A C G A T G C A T A C G T A C G T A C G T A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:8
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CGCAGGCTGTATT
--CCTGCTGAGH-
 G T A C C T A G A T G C C G T A C T A G A T C G G A T C A C G T A C T G A G C T C T G A C G A T G C A T
A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CGCAGGCTGTATT
-ACAGGATGTGGT
 G T A C C T A G A T G C C G T A C T A G A T C G G A T C A C G T A C T G A G C T C T G A C G A T G C A T
A C G T T C G A T A G C G T C A A C T G C T A G C G T A C G A T A C T G A C G T A C T G A C T G A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CGCAGGCTGTATT-
TCNCCTGCTGNGNNN
 A C G T G T A C C T A G A T G C C G T A C T A G A T C G G A T C A C G T A C T G A G C T C T G A C G A T G C A T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G