Information for 8-CATGCATAYG (Motif 34)

G T A C C T G A A C G T A C T G A G T C C G T A A C G T C G T A A G C T C T A G
Reverse Opposite:
A G T C C T G A A C G T C G T A A C G T A C T G A G T C C G T A A G C T A C T G
p-value:1e-8
log p-value:-1.953e+01
Information Content per bp:1.894
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.19%
Number of Background Sequences with motif32.0
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets45.8 +/- 26.7bp
Average Position of motif in Background46.2 +/- 25.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:1
Score:0.85
Offset:1
Orientation:forward strand
Alignment:CATGCATAYG-
-ATGMATATDC
 G T A C C T G A A C G T A C T G A G T C C G T A A C G T C G T A A G C T C T A G A C G T
A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.77
Offset:1
Orientation:forward strand
Alignment:CATGCATAYG-
-ATGAATATTC
 G T A C C T G A A C G T A C T G A G T C C G T A A C G T C G T A A G C T C T A G A C G T
A C G T G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C

POU2F2/MA0507.1/Jaspar

Match Rank:3
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-CATGCATAYG--
ATATGCAAATNNN
 A C G T G T A C C T G A A C G T A C T G A G T C C G T A A C G T C G T A A G C T C T A G A C G T A C G T
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

PH0148.1_Pou3f3/Jaspar

Match Rank:4
Score:0.75
Offset:-4
Orientation:forward strand
Alignment:----CATGCATAYG---
AAAATATGCATAATAAA
 A C G T A C G T A C G T A C G T G T A C C T G A A C G T A C T G A G T C C G T A A C G T C G T A A G C T C T A G A C G T A C G T A C G T
G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:5
Score:0.72
Offset:0
Orientation:forward strand
Alignment:CATGCATAYG-----
YATGCATATRCATRT
 G T A C C T G A A C G T A C T G A G T C C G T A A C G T C G T A A G C T C T A G A C G T A C G T A C G T A C G T A C G T
G A T C C G T A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T

Bhlha15/MA0607.1/Jaspar

Match Rank:6
Score:0.69
Offset:3
Orientation:forward strand
Alignment:CATGCATAYG-
---CCATATGT
 G T A C C T G A A C G T A C T G A G T C C G T A A C G T C G T A A G C T C T A G A C G T
A C G T A C G T A C G T T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CATGCATAYG
TTATGCAAAT-
 A C G T G T A C C T G A A C G T A C T G A G T C C G T A A C G T C G T A A G C T C T A G
C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CATGCATAYG---
CTCATGAATATTCAT
 A C G T A C G T G T A C C T G A A C G T A C T G A G T C C G T A A C G T C G T A A G C T C T A G A C G T A C G T A C G T
T A G C G A C T G A T C C G T A A C G T T C A G G T C A C G T A A C G T C G T A C G A T A C G T A G T C C G T A C G A T

NEUROD2/MA0668.1/Jaspar

Match Rank:9
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CATGCATAYG--
--ACCATATGGC
 G T A C C T G A A C G T A C T G A G T C C G T A A C G T C G T A A G C T C T A G A C G T A C G T
A C G T A C G T C T G A T G A C G T A C C T G A A C G T C T G A G A C T A T C G A C T G A G T C

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CATGCATAYG--
WATGCAAATGAG
 G T A C C T G A A C G T A C T G A G T C C G T A A C G T C G T A A G C T C T A G A C G T A C G T
G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G