Information for 7-CCCTCAGGAC (Motif 28)

G A T C G T A C A T G C C A G T A T G C C G T A C T A G T C A G C G T A T G A C
Reverse Opposite:
A C T G G C A T A G T C G A T C G C A T T A C G G T C A T A C G C A T G C T A G
p-value:1e-8
log p-value:-2.018e+01
Information Content per bp:1.557
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.92%
Number of Background Sequences with motif283.5
Percentage of Background Sequences with motif0.59%
Average Position of motif in Targets47.0 +/- 26.3bp
Average Position of motif in Background49.0 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CCCTCAGGAC
AGCCACTCAAG--
 A C G T A C G T A C G T G A T C G T A C A T G C C A G T A T G C C G T A C T A G T C A G C G T A T G A C
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T A C G T

GCM2/MA0767.1/Jaspar

Match Rank:2
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CCCTCAGGAC
TACCCGCATN--
 A C G T A C G T G A T C G T A C A T G C C A G T A T G C C G T A C T A G T C A G C G T A T G A C
G A C T C T G A A G T C G T A C G T A C T A C G A G T C T C G A A G C T T G C A A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CCCTCAGGAC--
GCCTCAGGGCAT
 G A T C G T A C A T G C C A G T A T G C C G T A C T A G T C A G C G T A T G A C A C G T A C G T
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

PB0024.1_Gcm1_1/Jaspar

Match Rank:4
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----CCCTCAGGAC-
TCGTACCCGCATCATT
 A C G T A C G T A C G T A C G T A C G T G A T C G T A C A T G C C A G T A T G C C G T A C T A G T C A G C G T A T G A C A C G T
G C A T T G A C T C A G C G A T T C G A G T A C G T A C G T A C A T C G A G T C C G T A A G C T T A G C C G T A G A C T C A G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:5
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CCCTCAGGAC--
SCCTSAGGSCAW
 G A T C G T A C A T G C C A G T A T G C C G T A C T A G T C A G C G T A T G A C A C G T A C G T
A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

GCM1/MA0646.1/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CCCTCAGGAC
GTACCCGCATN--
 A C G T A C G T A C G T G A T C G T A C A T G C C A G T A T G C C G T A C T A G T C A G C G T A T G A C
T A C G A G C T T C G A T A G C T G A C G T A C C A T G A G T C C G T A A G C T T C A G A C G T A C G T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CCCTCAGGAC-
TGCCCTGAGGGCA
 A C G T A C G T G A T C G T A C A T G C C A G T A T G C C G T A C T A G T C A G C G T A T G A C A C G T
G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CCCTCAGGAC-
TGCCCNNAGGGCA
 A C G T A C G T G A T C G T A C A T G C C A G T A T G C C G T A C T A G T C A G C G T A T G A C A C G T
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CCCTCAGGAC-
TGCCCTNAGGGCA
 A C G T A C G T G A T C G T A C A T G C C A G T A T G C C G T A C T A G T C A G C G T A T G A C A C G T
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A

THAP1/MA0597.1/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CCCTCAGGAC
CTGCCCGCA----
 A C G T A C G T A C G T G A T C G T A C A T G C C A G T A T G C C G T A C T A G T C A G C G T A T G A C
A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T A C G T A C G T