Information for 12-AGRWKWMAGRGCAATT (Motif 17)

C G T A A C T G C T A G C G T A C A T G C G T A G T C A C G T A A C T G C T A G A C T G A T G C C G T A C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A C G A T A C G T A T C G A G T C A G T C A G T C A C G T A C G T C G A T G T A C C G A T G A T C A G T C A C G T
p-value:1e-11
log p-value:-2.561e+01
Information Content per bp:1.844
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets37.6 +/- 17.0bp
Average Position of motif in Background35.6 +/- 10.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0024.1_Dlx5/Jaspar

Match Rank:1
Score:0.59
Offset:7
Orientation:forward strand
Alignment:AGRWKWMAGRGCAATT-------
-------GGGGTAATTAGCTCTG
 C G T A A C T G C T A G C G T A C A T G C G T A G T C A C G T A A C T G C T A G A C T G A T G C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A T C G T C A G T C A G G A C T G T C A C G T A G A C T C A G T C T G A T A C G A G T C A C G T T G A C A C G T A T C G

PH0007.1_Barx1/Jaspar

Match Rank:2
Score:0.58
Offset:7
Orientation:forward strand
Alignment:AGRWKWMAGRGCAATT-------
-------AAAGTAATTAGTGAAT
 C G T A A C T G C T A G C G T A C A T G C G T A G T C A C G T A A C T G C T A G A C T G A T G C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A G T C A T C G A T A C G G A C T T G C A G T C A A C G T A C G T C T G A A T C G A G C T C A T G G C T A C G T A G C A T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGRWKWMAGRGCAATT
TAGGGCAAAGGTCA---
 A C G T C G T A A C T G C T A G C G T A C A T G C G T A G T C A C G T A A C T G C T A G A C T G A T G C C G T A C G T A A C G T A C G T
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T A C G T A C G T

Hmx1/MA0896.1/Jaspar

Match Rank:4
Score:0.58
Offset:6
Orientation:forward strand
Alignment:AGRWKWMAGRGCAATT-------
------ACAAGCAATTAATGAAT
 C G T A A C T G C T A G C G T A C A T G C G T A G T C A C G T A A C T G C T A G A C T G A T G C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:5
Score:0.58
Offset:6
Orientation:forward strand
Alignment:AGRWKWMAGRGCAATT-------
------ACAAGCAATTAATGAAT
 C G T A A C T G C T A G C G T A C A T G C G T A G T C A C G T A A C T G C T A G A C T G A T G C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

NR1H2::RXRA/MA0115.1/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AGRWKWMAGRGCAATT
AAAGGTCAAAGGTCAAC-
 A C G T A C G T C G T A A C T G C T A G C G T A C A T G C G T A G T C A C G T A A C T G C T A G A C T G A T G C C G T A C G T A A C G T A C G T
G T C A C T G A C T G A A C T G A C T G A C G T A G T C C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A C G T A A T G C A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AGRWKWMAGRGCAATT
GTAGGGCAAAGGTCA---
 A C G T A C G T C G T A A C T G C T A G C G T A C A T G C G T A G T C A C G T A A C T G C T A G A C T G A T G C C G T A C G T A A C G T A C G T
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T A C G T A C G T

Msx3/MA0709.1/Jaspar

Match Rank:8
Score:0.57
Offset:10
Orientation:forward strand
Alignment:AGRWKWMAGRGCAATT--
----------CCAATTAA
 C G T A A C T G C T A G C G T A C A T G C G T A G T C A C G T A A C T G C T A G A C T G A T G C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C G A T C T C G A T G C A A C G T G A C T C G T A T C G A

PH0009.1_Bsx/Jaspar

Match Rank:9
Score:0.57
Offset:7
Orientation:forward strand
Alignment:AGRWKWMAGRGCAATT-------
-------CAGGTAATTACCTCAG
 C G T A A C T G C T A G C G T A C A T G C G T A G T C A C G T A A C T G C T A G A C T G A T G C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C T G C A C T A G C A T G G A C T T G C A G T C A A C G T A C G T C T G A A T G C G A T C A G C T T A G C C T G A C T A G

Nobox/MA0125.1/Jaspar

Match Rank:10
Score:0.57
Offset:9
Orientation:reverse strand
Alignment:AGRWKWMAGRGCAATT-
---------ACCAATTA
 C G T A A C T G C T A G C G T A C A T G C G T A G T C A C G T A A C T G C T A G A C T G A T G C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A T G C G A T C G T C A G T C A A C G T C G A T C T G A