Information for 11-CAGATTTAKWAGAAGT (Motif 16)

A G T C C G T A T A C G C G T A G A C T G A C T A G C T T G C A A C T G G C A T C G T A A T C G C T G A G T C A C A T G C A G T
Reverse Opposite:
G C T A G A T C A C G T A G C T A T G C A C G T C G T A T G A C A C G T C T G A C T G A C G T A C G A T A G T C A C G T C T A G
p-value:1e-11
log p-value:-2.561e+01
Information Content per bp:1.715
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.6 +/- 24.5bp
Average Position of motif in Background30.1 +/- 19.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:1
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CAGATTTAKWAGAAGT
---NTTTCTNAGAAA-
 A G T C C G T A T A C G C G T A G A C T G A C T A G C T T G C A A C T G G C A T C G T A A T C G C T G A G T C A C A T G C A G T
A C G T A C G T A C G T C T G A A C G T A C G T A C G T A G T C G A C T C G A T C T G A A C T G C G T A C G T A T C G A A C G T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:2
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CAGATTTAKWAGAAGT
---ATTTCCAAGAA--
 A G T C C G T A T A C G C G T A G A C T G A C T A G C T T G C A A C T G G C A T C G T A A T C G C T G A G T C A C A T G C A G T
A C G T A C G T A C G T C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A A C G T A C G T

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:3
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CAGATTTAKWAGAAGT
--NATTTCCNGGAAAT
 A G T C C G T A T A C G C G T A G A C T G A C T A G C T T G C A A C T G G C A T C G T A A T C G C T G A G T C A C A T G C A G T
A C G T A C G T A T G C C T G A G A C T A C G T A C G T G T A C G A T C C G A T C T A G C A T G C G T A C G T A C T G A G A C T

STAT3/MA0144.2/Jaspar

Match Rank:4
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:CAGATTTAKWAGAAGT
----TTTCCCAGAAN-
 A G T C C G T A T A C G C G T A G A C T G A C T A G C T T G C A A C T G G C A T C G T A A T C G C T G A G T C A C A T G C A G T
A C G T A C G T A C G T A C G T G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G A C G T

PH0068.1_Hoxc13/Jaspar

Match Rank:5
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CAGATTTAKWAGAAGT
NAATTTTACGAGNTNN
 A G T C C G T A T A C G C G T A G A C T G A C T A G C T T G C A A C T G G C A T C G T A A T C G C T G A G T C A C A T G C A G T
G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T

STAT1/MA0137.3/Jaspar

Match Rank:6
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:CAGATTTAKWAGAAGT
----TTTCCTGGAAA-
 A G T C C G T A T A C G C G T A G A C T G A C T A G C T T G C A A C T G G C A T C G T A A T C G C T G A G T C A C A T G C A G T
A C G T A C G T A C G T A C G T G A C T A C G T A G C T G T A C A G T C G A C T C T A G A C T G T G C A C T G A T G C A A C G T

Stat4/MA0518.1/Jaspar

Match Rank:7
Score:0.52
Offset:4
Orientation:forward strand
Alignment:CAGATTTAKWAGAAGT--
----TTTCCAGGAAATGG
 A G T C C G T A T A C G C G T A G A C T G A C T A G C T T G C A A C T G G C A T C G T A A T C G C T G A G T C A C A T G C A G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T G C A T C A G T T G A C G A T C C T G A C T A G C T A G C G T A C G T A T C G A A G C T T A C G T C A G

POL002.1_INR/Jaspar

Match Rank:8
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-CAGATTTAKWAGAAGT
TCAGTCTT---------
 A C G T A G T C C G T A T A C G C G T A G A C T G A C T A G C T T G C A A C T G G C A T C G T A A T C G C T G A G T C A C A T G C A G T
C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0187.1_Tcf7_2/Jaspar

Match Rank:9
Score:0.50
Offset:3
Orientation:forward strand
Alignment:CAGATTTAKWAGAAGT--
---CCGTATTATAAACAA
 A G T C C G T A T A C G C G T A G A C T G A C T A G C T T G C A A C T G G C A T C G T A A T C G C T G A G T C A C A T G C A G T A C G T A C G T
A C G T A C G T A C G T G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:10
Score:0.50
Offset:3
Orientation:forward strand
Alignment:CAGATTTAKWAGAAGT
---NTTTCCNGGAAA-
 A G T C C G T A T A C G C G T A G A C T G A C T A G C T T G C A A C T G G C A T C G T A A T C G C T G A G T C A C A T G C A G T
A C G T A C G T A C G T T C A G A G C T A C G T A C G T G T A C G A T C C G T A C T A G C A T G G T C A C G T A T C G A A C G T