Information for 1-AGGACSACAAGGG (Motif 2)

C T G A A C T G C T A G G T C A T G A C A T C G G C T A A T G C T C G A G T C A A C T G C T A G A C T G
Reverse Opposite:
A G T C G A T C A G T C A C G T A C G T A T C G C A G T A T G C A C T G A C G T A G T C A G T C A G C T
p-value:1e-12
log p-value:-2.870e+01
Information Content per bp:1.795
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.46%
Number of Background Sequences with motif36.1
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets39.8 +/- 22.7bp
Average Position of motif in Background45.0 +/- 20.6bp
Strand Bias (log2 ratio + to - strand density)1.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:1
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AGGACSACAAGGG-
CATAAGACCACCATTAC
 A C G T A C G T A C G T C T G A A C T G C T A G G T C A T G A C A T C G G C T A A T G C T C G A G T C A A C T G C T A G A C T G A C G T
A G T C C G A T C A G T C T G A T G C A A C T G G T C A G A T C A T G C G T C A G A T C G A T C G C T A A C G T C A G T C T G A A G C T

Sox2/MA0143.3/Jaspar

Match Rank:2
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:AGGACSACAAGGG
-----AACAAAGG
 C T G A A C T G C T A G G T C A T G A C A T C G G C T A A T G C T C G A G T C A A C T G C T A G A C T G
A C G T A C G T A C G T A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:3
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:AGGACSACAAGGG
-----RACAAWGG
 C T G A A C T G C T A G G T C A T G A C A T C G G C T A A T G C T C G A G T C A A C T G C T A G A C T G
A C G T A C G T A C G T A C G T A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G

PB0200.1_Zfp187_2/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AGGACSACAAGGG---
NNAGGGACAAGGGCNC
 C T G A A C T G C T A G G T C A T G A C A T C G G C T A A T G C T C G A G T C A A C T G C T A G A C T G A C G T A C G T A C G T
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:5
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:AGGACSACAAGGG
---RNAACAATGG
 C T G A A C T G C T A G G T C A T G A C A T C G G C T A A T G C T C G A G T C A A C T G C T A G A C T G
A C G T A C G T A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G

Znf423/MA0116.1/Jaspar

Match Rank:6
Score:0.52
Offset:1
Orientation:forward strand
Alignment:AGGACSACAAGGG---
-GGCACCCAGGGGTGC
 C T G A A C T G C T A G G T C A T G A C A T C G G C T A A T G C T C G A G T C A A C T G C T A G A C T G A C G T A C G T A C G T
A C G T T C A G A T C G G T A C G T C A A G T C A G T C G A T C C G T A C T A G A C T G A C T G A C T G A C G T A C T G G T A C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:7
Score:0.52
Offset:0
Orientation:forward strand
Alignment:AGGACSACAAGGG
NWAACCACADNN-
 C T G A A C T G C T A G G T C A T G A C A T C G G C T A A T G C T C G A G T C A A C T G C T A G A C T G
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T

Sox3/MA0514.1/Jaspar

Match Rank:8
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:AGGACSACAAGGG
---AAAACAAAGG
 C T G A A C T G C T A G G T C A T G A C A T C G G C T A A T G C T C G A G T C A A C T G C T A G A C T G
A C G T A C G T A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G

Sox6/MA0515.1/Jaspar

Match Rank:9
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:AGGACSACAAGGG
---AAAACAATGG
 C T G A A C T G C T A G G T C A T G A C A T C G G C T A A T G C T C G A G T C A A C T G C T A G A C T G
A C G T A C G T A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:10
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:AGGACSACAAGGG
---VRRACAAWGG
 C T G A A C T G C T A G G T C A T G A C A T C G G C T A A T G C T C G A G T C A A C T G C T A G A C T G
A C G T A C G T A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G