Information for 7-TGCAGACTGC (Motif 19)

C A G T A T C G T G A C G T C A T C A G C G T A A T G C A G C T A T C G A G T C
Reverse Opposite:
T C A G T A G C T C G A T A C G G C A T A G T C A C G T A C T G T A G C G T C A
p-value:1e-6
log p-value:-1.492e+01
Information Content per bp:1.533
Number of Target Sequences with motif176.0
Percentage of Target Sequences with motif19.78%
Number of Background Sequences with motif6674.7
Percentage of Background Sequences with motif13.69%
Average Position of motif in Targets46.9 +/- 27.1bp
Average Position of motif in Background50.2 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:TGCAGACTGC-
-CCAGACRSVB
 C A G T A T C G T G A C G T C A T C A G C G T A A T G C A G C T A T C G A G T C A C G T
A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:TGCAGACTGC
-CCAGACAG-
 C A G T A T C G T G A C G T C A T C A G C G T A A T G C A G C T A T C G A G T C
A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:TGCAGACTGC
-BCAGACWA-
 C A G T A T C G T G A C G T C A T C A G C G T A A T G C A G C T A T C G A G T C
A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TGCAGACTGC
TGCTGACTCA
 C A G T A T C G T G A C G T C A T C A G C G T A A T G C A G C T A T C G A G T C
G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

MTF1/MA0863.1/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TGCAGACTGC--
TTTGCACACGGCAC
 A C G T A C G T C A G T A T C G T G A C G T C A T C A G C G T A A T G C A G C T A T C G A G T C A C G T A C G T
C A G T A C G T G A C T T C A G G T A C C G T A T A G C G T C A A G T C C A T G C A T G A G T C T G C A G A T C

Mafb/MA0117.2/Jaspar

Match Rank:6
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----TGCAGACTGC
AAAATGCTGACT--
 A C G T A C G T A C G T A C G T C A G T A T C G T G A C G T C A T C A G C G T A A T G C A G C T A T C G A G T C
C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:7
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----TGCAGACTGC
AATTTGCTGAC---
 A C G T A C G T A C G T A C G T C A G T A T C G T G A C G T C A T C A G C G T A A T G C A G C T A T C G A G T C
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T A C G T

PB0042.1_Mafk_1/Jaspar

Match Rank:8
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------TGCAGACTGC
TAAAAATGCTGACTT-
 A C G T A C G T A C G T A C G T A C G T A C G T C A G T A T C G T G A C G T C A T C A G C G T A A T G C A G C T A T C G A G T C
C G A T C G T A C G T A C G T A G C T A C G T A G A C T C A T G G T A C G C A T C A T G C G T A A G T C G C A T G A C T A C G T

PB0044.1_Mtf1_1/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TGCAGACTGC--
NNTTTGCACACGGCCC
 A C G T A C G T A C G T A C G T C A G T A T C G T G A C G T C A T C A G C G T A A T G C A G C T A T C G A G T C A C G T A C G T
C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C

PB0060.1_Smad3_1/Jaspar

Match Rank:10
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----TGCAGACTGC---
CAAATCCAGACATCACA
 A C G T A C G T A C G T A C G T C A G T A T C G T G A C G T C A T C A G C G T A A T G C A G C T A T C G A G T C A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A