Information for 5-GGACAAGCAG (Motif 17)

C T A G A T C G C T G A A T G C G T C A C G T A T C A G T A G C T G C A A T C G
Reverse Opposite:
T A G C A C G T A T C G A G T C G C A T C A G T T A C G G A C T T A G C A G T C
p-value:1e-7
log p-value:-1.713e+01
Information Content per bp:1.653
Number of Target Sequences with motif93.0
Percentage of Target Sequences with motif10.45%
Number of Background Sequences with motif2808.7
Percentage of Background Sequences with motif5.76%
Average Position of motif in Targets52.3 +/- 27.8bp
Average Position of motif in Background50.4 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Dux/MA0611.1/Jaspar

Match Rank:1
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GGACAAGCAG
--CCAATCAA
 C T A G A T C G C T G A A T G C G T C A C G T A T C A G T A G C T G C A A T C G
A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GGACAAGCAG
TGGAACAGMA-
 A C G T C T A G A T C G C T G A A T G C G T C A C G T A T C A G T A G C T G C A A T C G
C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GGACAAGCAG
TGGAAAA----
 A C G T C T A G A T C G C T G A A T G C G T C A C G T A T C A G T A G C T G C A A T C G
C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:4
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GGACAAGCAG---
CATAAGACCACCATTAC
 A C G T A C G T A C G T A C G T C T A G A T C G C T G A A T G C G T C A C G T A T C A G T A G C T G C A A T C G A C G T A C G T A C G T
A G T C C G A T C A G T C T G A T G C A A C T G G T C A G A T C A T G C G T C A G A T C G A T C G C T A A C G T C A G T C T G A A G C T

PB0200.1_Zfp187_2/Jaspar

Match Rank:5
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----GGACAAGCAG--
NNAGGGACAAGGGCNC
 A C G T A C G T A C G T A C G T C T A G A T C G C T G A A T G C G T C A C G T A T C A G T A G C T G C A A T C G A C G T A C G T
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C

NFYB/MA0502.1/Jaspar

Match Rank:6
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----GGACAAGCAG
AAATGGACCAATCAG
 A C G T A C G T A C G T A C G T A C G T C T A G A T C G C T G A A T G C G T C A C G T A T C A G T A G C T G C A A T C G
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G

NFY(CCAAT)/Promoter/Homer

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GGACAAGCAG
AGCCAATCGG
 C T A G A T C G C T G A A T G C G T C A C G T A T C A G T A G C T G C A A T C G
T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

NFYA/MA0060.2/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GGACAAGCAG------
TGGACCAATCAGCACTCT
 A C G T A C G T C T A G A T C G C T G A A T G C G T C A C G T A T C A G T A G C T G C A A T C G A C G T A C G T A C G T A C G T A C G T A C G T
A G C T A T C G T C A G C T G A A T G C A G T C C G T A T C G A G A C T T A G C T C G A T C A G T G A C C T G A A T G C A C G T G T A C C G A T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:9
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GGACAAGCAG
TRAGGTCA-----
 A C G T A C G T A C G T C T A G A T C G C T G A A T G C G T C A C G T A T C A G T A G C T G C A A T C G
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:10
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GGACAAGCAG
---CACGCA-
 C T A G A T C G C T G A A T G C G T C A C G T A T C A G T A G C T G C A A T C G
A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T