Information for 8-CCCWCWGMKTCTKGST (Motif 18)

A G T C A G T C A G T C C G A T A G T C C G A T A C T G T G C A A C T G A C G T G T A C A C G T A C G T A C T G A T C G A C G T
Reverse Opposite:
C G T A A T G C A G T C G T C A C G T A A C T G C G T A G T A C A C G T A G T C C G T A A C T G C G T A C T A G C T A G A C T G
p-value:1e-9
log p-value:-2.137e+01
Information Content per bp:1.847
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.4 +/- 28.6bp
Average Position of motif in Background24.4 +/- 20.7bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.52
Offset:7
Orientation:forward strand
Alignment:CCCWCWGMKTCTKGST-
-------GGTCTGGCAT
 A G T C A G T C A G T C C G A T A G T C C G A T A C T G T G C A A C T G A C G T G T A C A C G T A C G T A C T G A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:2
Score:0.51
Offset:0
Orientation:forward strand
Alignment:CCCWCWGMKTCTKGST
CCTGCTGAGH------
 A G T C A G T C A G T C C G A T A G T C C G A T A C T G T G C A A C T G A C G T G T A C A C G T A C G T A C T G A T C G A C G T
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.50
Offset:4
Orientation:forward strand
Alignment:CCCWCWGMKTCTKGST
----VBSYGTCTGG--
 A G T C A G T C A G T C C G A T A G T C C G A T A C T G T G C A A C T G A C G T G T A C A C G T A C G T A C T G A T C G A C G T
A C G T A C G T A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T

PB0139.1_Irf5_2/Jaspar

Match Rank:4
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:CCCWCWGMKTCTKGST---
----NNAATTCTCGNTNAN
 A G T C A G T C A G T C C G A T A G T C C G A T A C T G T G C A A C T G A C G T G T A C A C G T A C G T A C T G A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.49
Offset:6
Orientation:forward strand
Alignment:CCCWCWGMKTCTKGST
------CTGTCTGG--
 A G T C A G T C A G T C C G A T A G T C C G A T A C T G T G C A A C T G A C G T G T A C A C G T A C G T A C T G A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T

Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer

Match Rank:6
Score:0.48
Offset:1
Orientation:forward strand
Alignment:CCCWCWGMKTCTKGST-----
-ACTYKNATTCGTGNTACTTC
 A G T C A G T C A G T C C G A T A G T C C G A T A C T G T G C A A C T G A C G T G T A C A C G T A C G T A C T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T G A G T A C G A C T A G T C C A G T T G C A C T G A A C G T A G C T G A T C C T A G C G A T A C T G A T G C G A C T C T G A G A T C G A C T A G C T G A T C

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.46
Offset:3
Orientation:reverse strand
Alignment:CCCWCWGMKTCTKGST--
---BCNGGTTCTAGANCN
 A G T C A G T C A G T C C G A T A G T C C G A T A C T G T G C A A C T G A C G T G T A C A C G T A C G T A C T G A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:8
Score:0.46
Offset:-5
Orientation:forward strand
Alignment:-----CCCWCWGMKTCTKGST
GGCCYCCTGCTGDGH------
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C C G A T A G T C C G A T A C T G T G C A A C T G A C G T G T A C A C G T A C G T A C T G A T C G A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T A C G T A C G T A C G T A C G T

PB0138.1_Irf4_2/Jaspar

Match Rank:9
Score:0.45
Offset:4
Orientation:forward strand
Alignment:CCCWCWGMKTCTKGST---
----AGTATTCTCGGTTGC
 A G T C A G T C A G T C C G A T A G T C C G A T A C T G T G C A A C T G A C G T G T A C A C G T A C G T A C T G A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C

ZIC4/MA0751.1/Jaspar

Match Rank:10
Score:0.45
Offset:-5
Orientation:forward strand
Alignment:-----CCCWCWGMKTCTKGST
GACCCCCCGCTGTGC------
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C C G A T A G T C C G A T A C T G T G C A A C T G A C G T G T A C A C G T A C G T A C T G A T C G A C G T
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C A C G T A C G T A C G T A C G T A C G T A C G T