Information for 4-AAAGCCTCAGKCTCWT (Motif 5)

C T G A G C T A C G T A C T A G G T A C G T A C C G A T A T G C G C T A A C T G C A G T G A T C C G A T G A T C G C A T A G C T
Reverse Opposite:
T C G A C G T A C T A G C G T A C T A G G T C A G T A C C G A T A T C G G C T A A C T G C A T G G A T C C G A T C G A T A G C T
p-value:1e-11
log p-value:-2.697e+01
Information Content per bp:1.660
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.74%
Number of Background Sequences with motif41.0
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets41.9 +/- 27.5bp
Average Position of motif in Background48.8 +/- 22.3bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:1
Score:0.67
Offset:2
Orientation:forward strand
Alignment:AAAGCCTCAGKCTCWT
--AGCCTCAGGCA---
 C T G A G C T A C G T A C T A G G T A C G T A C C G A T A T G C G C T A A C T G C A G T G A T C C G A T G A T C G C A T A G C T
A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T A C G T A C G T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AAAGCCTCAGKCTCWT
ANTGCCTGAGGCAAN-
 C T G A G C T A C G T A C T A G G T A C G T A C C G A T A T G C G C T A A C T G C A G T G A T C C G A T G A T C G C A T A G C T
C G T A C A G T G A C T C A T G G A T C G A T C C A G T T A C G T G C A C A T G C A T G A G T C C G T A G T C A G A C T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:3
Score:0.65
Offset:2
Orientation:forward strand
Alignment:AAAGCCTCAGKCTCWT
--AGCCTCAGGCA---
 C T G A G C T A C G T A C T A G G T A C G T A C C G A T A T G C G C T A A C T G C A G T G A T C C G A T G A T C G C A T A G C T
A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:4
Score:0.64
Offset:2
Orientation:forward strand
Alignment:AAAGCCTCAGKCTCWT
--CGCCTCAGGCA---
 C T G A G C T A C G T A C T A G G T A C G T A C C G A T A T G C G C T A A C T G C A G T G A T C C G A T G A T C G C A T A G C T
A C G T A C G T G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:AAAGCCTCAGKCTCWT
-AAACCACAGAN----
 C T G A G C T A C G T A C T A G G T A C G T A C C G A T A T G C G C T A A C T G C A G T G A T C C G A T G A T C G C A T A G C T
A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:AAAGCCTCAGKCTCWT
NTNGCCTCAGGCNNN-
 C T G A G C T A C G T A C T A G G T A C G T A C C G A T A T G C G C T A A C T G C A G T G A T C C G A T G A T C G C A T A G C T
G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AAAGCCTCAGKCTCWT
-AAACCACANN-----
 C T G A G C T A C G T A C T A G G T A C G T A C C G A T A T G C G C T A A C T G C A G T G A T C C G A T G A T C G C A T A G C T
A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AAAGCCTCAGKCTCWT
NAAACCACAG------
 C T G A G C T A C G T A C T A G G T A C G T A C C G A T A T G C G C T A A C T G C A G T G A T C C G A T G A T C G C A T A G C T
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AAAGCCTCAGKCTCWT
WTGSCCTSAGGS----
 C T G A G C T A C G T A C T A G G T A C G T A C C G A T A T G C G C T A A C T G C A G T G A T C C G A T G A T C G C A T A G C T
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AAAGCCTCAGKCTCWT
NWAACCACADNN----
 C T G A G C T A C G T A C T A G G T A C G T A C C G A T A T G C G C T A A C T G C A G T G A T C C G A T G A T C G C A T A G C T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T A C G T